InterPro Scan Result: J013002C13

SEQUENCE: Sequence_1_1_ORF1 CRC64: 34ADCD4F2AD4A5A6 LENGTH: 65 aa
noIPR
unintegrated
unintegrated
seg[4-15]? NA seg segseg
SEQUENCE: Sequence_1_1_ORF2 CRC64: B055179A14C4B851 LENGTH: 51 aa
noIPR
unintegrated
unintegrated
seg[1-14]? NA seg segseg
SEQUENCE: Sequence_1_1_ORF3 CRC64: D99DDAC1A185BC52 LENGTH: 53 aa
No hits reported.
SEQUENCE: Sequence_1_1_ORF4 CRC64: 2E991E27208DCC0A LENGTH: 72 aa
noIPR
unintegrated
unintegrated
seg[49-60]? NA seg segseg
SEQUENCE: Sequence_1_1_ORF5 CRC64: E15CE3A0251ED83B LENGTH: 68 aa
No hits reported.
SEQUENCE: Sequence_1_2_ORF2 CRC64: 1173A46809E12AEF LENGTH: 138 aa
noIPR
unintegrated
unintegrated
seg[33-67]? NA seg seg[73-91]? NA seg segseg
SEQUENCE: Sequence_1_2_ORF3 CRC64: FCE54BE71B936C52 LENGTH: 61 aa
No hits reported.
SEQUENCE: Sequence_1_3_ORF1 CRC64: 7FA031828449EF9A LENGTH: 725 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[106-176]T 1.1e-17 PF00076 RRM_1[194-262]T 2.5e-18 PF00076 RRM_1[285-353]T 4.5e-25 PF00076 RRM_1[388-457]T 4.4e-18 PF00076 RRM_1RRM_1
SM00360[105-178]T 2.1e-22 SM00360 no description[193-265]T 1.5e-23 SM00360 no description[284-356]T 1.1e-29 SM00360 no description[387-460]T 3.3e-23 SM00360 no descriptionno description
PS50102[104-182]T 17.899 PS50102 RRM[192-264]T 17.541 PS50102 RRM[283-360]T 19.911 PS50102 RRM[386-464]T 18.376 PS50102 RRMRRM
InterPro
IPR002004
Domain
Polyadenylate-binding protein/Hyperplastic disc protein
PF00658[631-699]T 1.1e-27 PF00658 PABPPABP
SM00517[639-702]T 2.1e-37 SM00517 no descriptionno description
PS51309[627-704]T 20.705 PS51309 PABCPABC
SSF63570[566-720]T 6.8e-44 SSF63570 PABC (PABP) domainPABC (PABP) domain
InterPro
IPR003954
Domain
RNA recognition, domain 1
SM00361[105-178]T 0.3 SM00361 no description[193-265]T 7.1 SM00361 no description[284-356]T 0.00055 SM00361 no description[387-460]T 0.46 SM00361 no descriptionno description
InterPro
IPR006515
Family
Polyadenylate binding protein, human types 1, 2, 3, 4
TIGR01628[104-700]T 1.7e-279 TIGR01628 PABP-1234: polyadenylate binding protein, hPABP-1234: polyadenylate binding protein, h
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[102-180]T 2.4e-23 G3DSA:3.30.70.330 no description[181-274]T 2.8e-23 G3DSA:3.30.70.330 no description[278-375]T 1e-26 G3DSA:3.30.70.330 no description[381-479]T 1.8e-23 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
coil[362-383]? NA coil coiled-coilcoiled-coil
PTHR10432[98-469]T 1.7e-189 PTHR10432 RNA-BINDING PROTEINRNA-BINDING PROTEIN
PTHR10432:SF69[98-469]T 1.7e-189 PTHR10432:SF69 POLYADENYLATE-BINDING PROTEINPOLYADENYLATE-BINDING PROTEIN
seg[20-47]? NA seg seg[65-105]? NA seg seg[496-505]? NA seg seg[548-562]? NA seg seg[580-593]? NA seg segseg
SSF54928[69-188]T 3.5e-24 SSF54928 RNA-binding domain, RBD[184-273]T 4.4e-22 SSF54928 RNA-binding domain, RBD[266-365]T 2.7e-26 SSF54928 RNA-binding domain, RBD[383-496]T 1.6e-25 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: Sequence_1_3_ORF2 CRC64: A7F63BE67BC1D20C LENGTH: 69 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF2 CRC64: 320D943AA054E6BC LENGTH: 71 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF3 CRC64: 6D959B20F243E930 LENGTH: 51 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF4 CRC64: B08CCC4D5B45155C LENGTH: 92 aa
noIPR
unintegrated
unintegrated
seg[1-75]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF2 CRC64: C0FF748423C407D2 LENGTH: 53 aa
No hits reported.
SEQUENCE: Sequence_1_5_ORF3 CRC64: 93A73574C2089B34 LENGTH: 219 aa
noIPR
unintegrated
unintegrated
seg[48-68]? NA seg seg[75-98]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF4 CRC64: 8262D631B2F12A66 LENGTH: 59 aa
No hits reported.
SEQUENCE: Sequence_1_5_ORF5 CRC64: EC5DA596AC55EDFD LENGTH: 75 aa
noIPR
unintegrated
unintegrated
seg[48-75]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF2 CRC64: 160945F3A4908BAA LENGTH: 59 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF3 CRC64: 208DEB78D5B63D09 LENGTH: 117 aa
noIPR
unintegrated
unintegrated
seg[13-24]? NA seg seg[47-57]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF4 CRC64: 2656CAD4AEAE0E0A LENGTH: 62 aa
noIPR
unintegrated
unintegrated
seg[18-30]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF5 CRC64: F9EB122FB658FD4C LENGTH: 74 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF6 CRC64: B7FA290D385EDD5E LENGTH: 125 aa
noIPR
unintegrated
unintegrated
seg[81-96]? NA seg seg[101-125]? NA seg segseg
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