InterPro Scan Result: J023019N18

SEQUENCE: Sequence_1_1_ORF1 CRC64: 905CA86760B6B444 LENGTH: 138 aa
noIPR
unintegrated
unintegrated
coil[53-74]? NA coil coiled-coilcoiled-coil
seg[5-27]? NA seg seg[64-75]? NA seg seg[119-130]? NA seg segseg
SEQUENCE: Sequence_1_1_ORF2 CRC64: DE2F8C33925F8C2F LENGTH: 281 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[31-70]T 0.011 SM00320 no description[73-113]T 4.6e-07 SM00320 no description[116-153]T 0.56 SM00320 no description[156-194]T 1.2 SM00320 no description[197-240]T 16 SM00320 no description[244-281]T 15 SM00320 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[11-281]T 8.4e-53 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[8-280]T 4.4e-50 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[1-281]T 30.136 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019775
Conserved_site
WD40 repeat, conserved site
PS00678[100-114]T NA PS00678 WD_REPEATS_1[140-154]T NA PS00678 WD_REPEATS_1WD_REPEATS_1
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[11-28]T 0.026 PF00400 WD40[34-70]T 0.072 PF00400 WD40[75-113]T 2.7e-08 PF00400 WD40[126-153]T 0.034 PF00400 WD40[158-193]T 0.046 PF00400 WD40[219-240]T 0.039 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[8-37]T 9.740 PS50082 WD_REPEATS_2[80-122]T 12.413 PS50082 WD_REPEATS_2[136-162]T 9.272 PS50082 WD_REPEATS_2[221-240]T 8.537 PS50082 WD_REPEATS_2WD_REPEATS_2
InterPro
IPR020472
Region
G-protein beta WD-40 repeat, region
PR00320[15-29]T 1.9e-08 PR00320 GPROTEINBRPT[100-114]T 1.9e-08 PR00320 GPROTEINBRPT[140-154]T 1.9e-08 PR00320 GPROTEINBRPTGPROTEINBRPT
noIPR
unintegrated
unintegrated
PTHR19878[18-281]T 2.7e-55 PTHR19878 AUTOPHAGY PROTEIN 16-LIKEAUTOPHAGY PROTEIN 16-LIKE
seg[169-175]? NA seg seg[255-262]? NA seg segseg
SEQUENCE: Sequence_1_2_ORF2 CRC64: D8345E958F74B014 LENGTH: 243 aa
InterPro
IPR013923
Domain
Autophagy-related protein 16
PF08614[61-170]T 4.9e-10 PF08614 ATG16ATG16
noIPR
unintegrated
unintegrated
coil[87-157]? NA coil coiled-coil[165-186]? NA coil coiled-coilcoiled-coil
PTHR19878[69-238]T 1.4e-14 PTHR19878 AUTOPHAGY PROTEIN 16-LIKEAUTOPHAGY PROTEIN 16-LIKE
seg[1-11]? NA seg seg[24-49]? NA seg segseg
SEQUENCE: Sequence_1_2_ORF3 CRC64: E3E42CCF11EFCF85 LENGTH: 50 aa
No hits reported.
SEQUENCE: Sequence_1_3_ORF1 CRC64: 58CFC01121136859 LENGTH: 102 aa
noIPR
unintegrated
unintegrated
seg[1-15]? NA seg seg[27-45]? NA seg seg[49-62]? NA seg seg[63-94]? NA seg segseg
SEQUENCE: Sequence_1_3_ORF2 CRC64: 56AFA86270054766 LENGTH: 52 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF2 CRC64: 5329363F97941E18 LENGTH: 64 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF3 CRC64: 1BE0BD4693C31E79 LENGTH: 100 aa
noIPR
unintegrated
unintegrated
seg[50-81]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF4 CRC64: 496172274C006886 LENGTH: 59 aa
noIPR
unintegrated
unintegrated
seg[7-38]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF5 CRC64: 318C1CD740D9303D LENGTH: 117 aa
noIPR
unintegrated
unintegrated
seg[1-23]? NA seg seg[56-67]? NA seg seg[82-109]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF2 CRC64: 634729D163275FD8 LENGTH: 133 aa
noIPR
unintegrated
unintegrated
seg[37-64]? NA seg seg[69-87]? NA seg seg[89-113]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF2 CRC64: 9D3C16DDA7B8522D LENGTH: 70 aa
noIPR
unintegrated
unintegrated
seg[15-30]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF3 CRC64: 142D12C5F074AE65 LENGTH: 55 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF4 CRC64: BBFCD81E1E440C90 LENGTH: 60 aa
noIPR
unintegrated
unintegrated
seg[2-16]? NA seg seg[39-50]? NA seg segseg
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science