InterPro Scan Result: J023041B11

SEQUENCE: Sequence_1_1_ORF1 CRC64: 2FACB4BE6AE46662 LENGTH: 58 aa
noIPR
unintegrated
unintegrated
seg[22-34]? NA seg segseg
SEQUENCE: Sequence_1_1_ORF2 CRC64: 629FFB4DFC0FC7D0 LENGTH: 51 aa
No hits reported.
SEQUENCE: Sequence_1_2_ORF2 CRC64: C53799C8CF43B9CB LENGTH: 309 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[88-144]T 1.3e-05 PF00076 RRM_1RRM_1
PS50102[49-151]T 11.145 PS50102 RRMRRM
InterPro
IPR000571
Domain
Zinc finger, CCCH-type
PF00642[19-43]T 3.6e-07 PF00642 zf-CCCH[155-178]T 0.00021 PF00642 zf-CCCHzf-CCCH
SM00356[18-44]T 0.0068 SM00356 no description[153-179]T 0.014 SM00356 no descriptionno description
PS50103[17-45]T 13.065 PS50103 ZF_C3H1[153-180]T 11.892 PS50103 ZF_C3H1ZF_C3H1
InterPro
IPR009145
Family
U2 auxiliary factor small subunit
PR01848[23-42]T 3.4e-64 PR01848 U2AUXFACTOR[42-62]T 3.4e-64 PR01848 U2AUXFACTOR[80-95]T 3.4e-64 PR01848 U2AUXFACTOR[108-130]T 3.4e-64 PR01848 U2AUXFACTOR[135-159]T 3.4e-64 PR01848 U2AUXFACTOR[170-182]T 3.4e-64 PR01848 U2AUXFACTORU2AUXFACTOR
PTHR12620[18-309]T 5.6e-120 PTHR12620 U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITU2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[48-150]T 5.4e-38 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
seg[191-296]? NA seg segseg
SSF54928[48-150]T 8.3e-25 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SSF90229[12-51]T 0.00056 SSF90229 CCCH zinc finger[148-186]T 0.0031 SSF90229 CCCH zinc fingerCCCH zinc finger
SEQUENCE: Sequence_1_2_ORF3 CRC64: 0FCEED3C9506E989 LENGTH: 50 aa
No hits reported.
SEQUENCE: Sequence_1_3_ORF2 CRC64: A998D0933CBFB4A2 LENGTH: 58 aa
noIPR
unintegrated
unintegrated
seg[42-51]? NA seg segseg
SEQUENCE: Sequence_1_3_ORF3 CRC64: 48E956085C874713 LENGTH: 135 aa
noIPR
unintegrated
unintegrated
seg[4-33]? NA seg seg[41-100]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF2 CRC64: B13ADA65F33603C1 LENGTH: 74 aa
noIPR
unintegrated
unintegrated
seg[29-74]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF3 CRC64: 5E676217BFA82CAC LENGTH: 67 aa
noIPR
unintegrated
unintegrated
seg[38-56]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF2 CRC64: F37739122C5DC783 LENGTH: 66 aa
No hits reported.
SEQUENCE: Sequence_1_5_ORF3 CRC64: D94F7BC6CE5AE4FA LENGTH: 176 aa
noIPR
unintegrated
unintegrated
seg[39-126]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF4 CRC64: B93BA7F51D8D8DF7 LENGTH: 127 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF2 CRC64: 92FF6D0FF79AA7D1 LENGTH: 101 aa
noIPR
unintegrated
unintegrated
seg[17-76]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF3 CRC64: CB461E06C93ABF31 LENGTH: 53 aa
No hits reported.
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science