InterPro Scan Result: RAFL04-19-J16

SEQUENCE: RAFL04-19-J16_1_ORF1 CRC64: 6C50996E0BA3F863 LENGTH: 231 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[105-173]T 4.1e-18 PF00076 RRM_1RRM_1
SM00360[104-175]T 8.1e-21 SM00360 no descriptionno description
PS50102[103-179]T 16.978 PS50102 RRMRRM
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[86-174]T 2e-21 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
coil[47-82]? NA coil coiled-coilcoiled-coil
PTHR23365[80-226]T 9.4e-28 PTHR23365 POLY-A BINDING PROTEIN 2POLY-A BINDING PROTEIN 2
seg[5-23]? NA seg seg[36-50]? NA seg seg[148-162]? NA seg seg[219-230]? NA seg segseg
SSF54928[68-208]T 2e-25 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL04-19-J16_2_ORF1 CRC64: 4F8017F24C01CC32 LENGTH: 56 aa
noIPR
unintegrated
unintegrated
seg[4-20]? NA seg seg[43-55]? NA seg segseg
SEQUENCE: RAFL04-19-J16_2_ORF2 CRC64: 243737891F593F34 LENGTH: 70 aa
InterPro
IPR007498
Family
Paraquat-inducible protein A
PF04403[8-66]T 8.4e-05 PF04403 PqiAPqiA
noIPR
unintegrated
unintegrated
seg[7-19]? NA seg segseg
SEQUENCE: RAFL04-19-J16_2_ORF3 CRC64: A77C8A8B0A12E208 LENGTH: 73 aa
No hits reported.
SEQUENCE: RAFL04-19-J16_4_ORF2 CRC64: CAD12ADD5B173374 LENGTH: 84 aa
noIPR
unintegrated
unintegrated
seg[16-27]? NA seg segseg
SEQUENCE: RAFL04-19-J16_4_ORF3 CRC64: 6FC867BF4E888CB4 LENGTH: 55 aa
No hits reported.
SEQUENCE: RAFL04-19-J16_4_ORF4 CRC64: 90330A7CE6FAC9FA LENGTH: 103 aa
noIPR
unintegrated
unintegrated
seg[19-36]? NA seg seg[86-100]? NA seg segseg
SEQUENCE: RAFL04-19-J16_5_ORF1 CRC64: 39939FE9E7075C86 LENGTH: 103 aa
No hits reported.
SEQUENCE: RAFL04-19-J16_6_ORF2 CRC64: F07E66BAB46A6B19 LENGTH: 64 aa
noIPR
unintegrated
unintegrated
seg[11-45]? NA seg seg[50-64]? NA seg segseg
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