InterPro Scan Result: RAFL05-04-H19

SEQUENCE: RAFL05-04-H19_1_ORF2 CRC64: 0419444EA40907AF LENGTH: 208 aa
InterPro
IPR001878
Domain
Zinc finger, CCHC-type
PF00098[136-150]T 2.5e-08 PF00098 zf-CCHC[189-205]T 1.2e-07 PF00098 zf-CCHCzf-CCHC
SM00343[135-151]T 1.3e-05 SM00343 no description[189-205]T 3.4e-05 SM00343 no descriptionno description
PS50158[136-151]T 11.499 PS50158 ZF_CCHC[190-205]T 10.938 PS50158 ZF_CCHCZF_CCHC
InterPro
IPR002059
Domain
Cold-shock protein, DNA-binding
PR00050[18-33]T 7.5e-11 PR00050 COLDSHOCK[39-48]T 7.5e-11 PR00050 COLDSHOCK[54-72]T 7.5e-11 PR00050 COLDSHOCKCOLDSHOCK
PF00313[15-81]T 2.4e-26 PF00313 CSDCSD
InterPro
IPR011129
Domain
Cold shock protein
SM00357[17-82]T 8.9e-23 SM00357 no descriptionno description
InterPro
IPR012340
Domain
Nucleic acid-binding, OB-fold
G3DSA:2.40.50.140[15-82]T 1.6e-13 G3DSA:2.40.50.140 no descriptionno description
InterPro
IPR016027
Domain
Nucleic acid-binding, OB-fold-like
SSF50249[16-83]T 6.7e-21 SSF50249 Nucleic acid-binding proteinsNucleic acid-binding proteins
InterPro
IPR019844
Conserved_site
Cold-shock conserved site
PS00352[29-48]T NA PS00352 COLD_SHOCKCOLD_SHOCK
noIPR
unintegrated
unintegrated
PTHR23002[69-208]T 2e-82 PTHR23002 ZINC FINGER CCHC DOMAIN CONTAINING PROTEINZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
PTHR23002:SF5[69-208]T 2e-82 PTHR23002:SF5 GLYCINE-RICH PROTEIN 2GLYCINE-RICH PROTEIN 2
seg[57-67]? NA seg seg[91-134]? NA seg seg[152-188]? NA seg segseg
SSF57756[122-205]T 2.1e-10 SSF57756 Retrovirus zinc finger-like domainsRetrovirus zinc finger-like domains
SEQUENCE: RAFL05-04-H19_2_ORF2 CRC64: 2A752658B0E9A6B9 LENGTH: 53 aa
No hits reported.
SEQUENCE: RAFL05-04-H19_2_ORF3 CRC64: 9D2CC494051F7FFE LENGTH: 55 aa
No hits reported.
SEQUENCE: RAFL05-04-H19_2_ORF4 CRC64: 3C3B8DBF0F449186 LENGTH: 195 aa
noIPR
unintegrated
unintegrated
seg[34-78]? NA seg seg[90-132]? NA seg segseg
SEQUENCE: RAFL05-04-H19_3_ORF2 CRC64: 344B01367264639D LENGTH: 73 aa
noIPR
unintegrated
unintegrated
seg[16-68]? NA seg segseg
SEQUENCE: RAFL05-04-H19_3_ORF3 CRC64: B76AC6720053DF6E LENGTH: 75 aa
noIPR
unintegrated
unintegrated
seg[1-36]? NA seg segseg
SEQUENCE: RAFL05-04-H19_4_ORF2 CRC64: 7061F955FAF90588 LENGTH: 118 aa
noIPR
unintegrated
unintegrated
seg[20-62]? NA seg seg[74-117]? NA seg segseg
SEQUENCE: RAFL05-04-H19_4_ORF3 CRC64: 4ABDBA5297ADBCEF LENGTH: 101 aa
No hits reported.
SEQUENCE: RAFL05-04-H19_5_ORF2 CRC64: CFB9A17813A97D5A LENGTH: 175 aa
noIPR
unintegrated
unintegrated
seg[38-78]? NA seg seg[90-118]? NA seg segseg
SEQUENCE: RAFL05-04-H19_6_ORF2 CRC64: 420855592C5FD4A4 LENGTH: 92 aa
noIPR
unintegrated
unintegrated
seg[4-48]? NA seg seg[64-83]? NA seg segseg
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