InterPro Scan Result: RAFL05-04-N01

SEQUENCE: RAFL05-04-N01_1_ORF2 CRC64: 2C14078641DDD519 LENGTH: 436 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[149-218]T 9.3e-18 PF00076 RRM_1RRM_1
SM00360[148-221]T 1.7e-21 SM00360 no descriptionno description
PS50102[147-225]T 17.319 PS50102 RRMRRM
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[125-248]T 1.2e-26 G3DSA:3.30.70.330 no descriptionno description
InterPro
IPR022023
Family
U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal
PF12220[48-139]T 7.1e-22 PF12220 U1snRNP70_NU1snRNP70_N
noIPR
unintegrated
unintegrated
PTHR13952[44-432]T 2.6e-143 PTHR13952 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDU1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
seg[60-75]? NA seg seg[232-259]? NA seg seg[264-289]? NA seg seg[295-381]? NA seg seg[418-434]? NA seg segseg
SSF54928[125-262]T 1.7e-23 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL05-04-N01_2_ORF1 CRC64: A1D1ABB5EE5C8D8D LENGTH: 51 aa
No hits reported.
SEQUENCE: RAFL05-04-N01_2_ORF2 CRC64: 5232D4872A9F1633 LENGTH: 244 aa
noIPR
unintegrated
unintegrated
seg[107-122]? NA seg seg[124-141]? NA seg segseg
SEQUENCE: RAFL05-04-N01_4_ORF2 CRC64: D13EC8810DBECE7E LENGTH: 79 aa
No hits reported.
SEQUENCE: RAFL05-04-N01_4_ORF3 CRC64: 1A513E4D49FCE87C LENGTH: 84 aa
noIPR
unintegrated
unintegrated
seg[1-48]? NA seg seg[60-78]? NA seg segseg
SEQUENCE: RAFL05-04-N01_4_ORF4 CRC64: 15E66FE6473EC6C4 LENGTH: 83 aa
No hits reported.
SEQUENCE: RAFL05-04-N01_4_ORF5 CRC64: 4B5ECF908C2B069C LENGTH: 54 aa
No hits reported.
SEQUENCE: RAFL05-04-N01_4_ORF6 CRC64: 6BF5D8B8BC2B28EA LENGTH: 60 aa
No hits reported.
SEQUENCE: RAFL05-04-N01_5_ORF2 CRC64: 34349871DC74D8E5 LENGTH: 224 aa
noIPR
unintegrated
unintegrated
seg[43-57]? NA seg seg[75-92]? NA seg seg[94-113]? NA seg segseg
SEQUENCE: RAFL05-04-N01_5_ORF3 CRC64: 21BA575BB2410B9F LENGTH: 51 aa
No hits reported.
SEQUENCE: RAFL05-04-N01_6_ORF2 CRC64: B0954C05A8FDF866 LENGTH: 59 aa
noIPR
unintegrated
unintegrated
seg[1-59]? NA seg segseg
SEQUENCE: RAFL05-04-N01_6_ORF3 CRC64: D502B26A4ACD45DD LENGTH: 109 aa
noIPR
unintegrated
unintegrated
seg[5-27]? NA seg seg[33-56]? NA seg seg[64-78]? NA seg segseg
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