InterPro Scan Result: RAFL06-10-E18

SEQUENCE: RAFL06-10-E18_1_ORF2 CRC64: E91A504FAC8860EE LENGTH: 459 aa
InterPro
IPR000217
Family
Tubulin
PR01161[19-39]T 8.9e-92 PR01161 TUBULIN[62-81]T 8.9e-92 PR01161 TUBULIN[104-115]T 8.9e-92 PR01161 TUBULIN[117-141]T 8.9e-92 PR01161 TUBULIN[143-161]T 8.9e-92 PR01161 TUBULIN[162-183]T 8.9e-92 PR01161 TUBULIN[187-200]T 8.9e-92 PR01161 TUBULIN[201-221]T 8.9e-92 PR01161 TUBULIN[389-417]T 8.9e-92 PR01161 TUBULINTUBULIN
PTHR11588[139-459]T 8.8e-236 PTHR11588 TUBULINTUBULIN
InterPro
IPR002452
Family
Alpha tubulin
PR01162[27-42]T 2.5e-119 PR01162 ALPHATUBULIN[54-67]T 2.5e-119 PR01162 ALPHATUBULIN[97-110]T 2.5e-119 PR01162 ALPHATUBULIN[129-137]T 2.5e-119 PR01162 ALPHATUBULIN[157-169]T 2.5e-119 PR01162 ALPHATUBULIN[170-181]T 2.5e-119 PR01162 ALPHATUBULIN[223-235]T 2.5e-119 PR01162 ALPHATUBULIN[283-298]T 2.5e-119 PR01162 ALPHATUBULIN[330-351]T 2.5e-119 PR01162 ALPHATUBULIN[356-369]T 2.5e-119 PR01162 ALPHATUBULIN[369-388]T 2.5e-119 PR01162 ALPHATUBULIN[394-410]T 2.5e-119 PR01162 ALPHATUBULIN[431-447]T 2.5e-119 PR01162 ALPHATUBULINALPHATUBULIN
PTHR11588:SF10[139-459]T 8.8e-236 PTHR11588:SF10 TUBULIN ALPHA CHAINTUBULIN ALPHA CHAIN
InterPro
IPR003008
Domain
Tubulin/FtsZ, GTPase domain
G3DSA:3.40.50.1440[10-276]T 2.2e-120 G3DSA:3.40.50.1440 no descriptionno description
PF00091[12-234]T 4.2e-70 PF00091 TubulinTubulin
InterPro
IPR008280
Domain
Tubulin/FtsZ, C-terminal
SSF55307[255-444]T 3.7e-83 SSF55307 Tubulin C-terminal domain-likeTubulin C-terminal domain-like
InterPro
IPR017975
Conserved_site
Tubulin, conserved site
PS00227[151-157]T NA PS00227 TUBULINTUBULIN
InterPro
IPR018316
Domain
Tubulin/FtsZ, 2-layer sandwich domain
G3DSA:3.30.1330.20[278-392]T 1.2e-47 G3DSA:3.30.1330.20 no descriptionno description
PF03953[272-402]T 1.4e-50 PF03953 Tubulin_CTubulin_C
SM00865[257-402]T 1.7e-52 SM00865 no descriptionno description
InterPro
IPR019746
Domain
Tubulin/FtsZ, N-terminal
SSF52490[10-254]T 8.6e-104 SSF52490 Tubulin nucleotide-binding domain-likeTubulin nucleotide-binding domain-like
noIPR
unintegrated
unintegrated
coil[427-448]? NA coil coiled-coilcoiled-coil
G3DSA:1.10.287.600[393-449]T 1.1e-21 G3DSA:1.10.287.600 no descriptionno description
SM00864[58-255]T 1.9e-73 SM00864 no descriptionno description
seg[151-167]? NA seg seg[442-458]? NA seg segseg
SEQUENCE: RAFL06-10-E18_2_ORF2 CRC64: 68782A208D71812A LENGTH: 72 aa
No hits reported.
SEQUENCE: RAFL06-10-E18_2_ORF3 CRC64: AC69AA71539C0511 LENGTH: 142 aa
noIPR
unintegrated
unintegrated
seg[64-87]? NA seg seg[98-120]? NA seg seg[123-138]? NA seg segseg
SEQUENCE: RAFL06-10-E18_2_ORF4 CRC64: AA8E0E2148F1A97C LENGTH: 89 aa
No hits reported.
SEQUENCE: RAFL06-10-E18_4_ORF2 CRC64: 00E4789DD94728AF LENGTH: 142 aa
No hits reported.
SEQUENCE: RAFL06-10-E18_4_ORF3 CRC64: C075451738BFC777 LENGTH: 233 aa
noIPR
unintegrated
unintegrated
seg[209-215]? NA seg seg[222-228]? NA seg segseg
SEQUENCE: RAFL06-10-E18_5_ORF2 CRC64: EC333AFF5BC2662E LENGTH: 75 aa
noIPR
unintegrated
unintegrated
seg[25-41]? NA seg segseg
SEQUENCE: RAFL06-10-E18_5_ORF3 CRC64: D7F3BA76981414E1 LENGTH: 60 aa
noIPR
unintegrated
unintegrated
seg[48-59]? NA seg segseg
SEQUENCE: RAFL06-10-E18_6_ORF2 CRC64: 8BFA3E3626999CA2 LENGTH: 52 aa
noIPR
unintegrated
unintegrated
seg[7-19]? NA seg segseg
SEQUENCE: RAFL06-10-E18_6_ORF3 CRC64: C3711E729A5B57DE LENGTH: 51 aa
No hits reported.
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science