InterPro Scan Result: RAFL06-70-F02

SEQUENCE: RAFL06-70-F02_1_ORF2 CRC64: 4AE175884E9A003A LENGTH: 462 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[137-203]T 4.2e-11 PF00076 RRM_1[231-301]T 3.1e-17 PF00076 RRM_1[350-414]T 2e-18 PF00076 RRM_1RRM_1
SM00360[136-211]T 3e-13 SM00360 no description[230-304]T 3.6e-19 SM00360 no description[349-416]T 4.9e-22 SM00360 no descriptionno description
PS50102[135-215]T 14.726 PS50102 RRM[229-308]T 17.285 PS50102 RRM[348-420]T 18.103 PS50102 RRMRRM
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[131-213]T 4.6e-16 G3DSA:3.30.70.330 no description[227-322]T 3.3e-21 G3DSA:3.30.70.330 no description[345-456]T 1.7e-23 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
PTHR10432[132-446]T 1.3e-178 PTHR10432 RNA-BINDING PROTEINRNA-BINDING PROTEIN
PTHR10432:SF67[132-446]T 1.3e-178 PTHR10432:SF67 NUCLEAR ACID BINDING PROTEINNUCLEAR ACID BINDING PROTEIN
seg[43-91]? NA seg seg[99-123]? NA seg seg[327-339]? NA seg seg[434-453]? NA seg segseg
SSF54928[100-213]T 3.8e-19 SSF54928 RNA-binding domain, RBD[216-310]T 3.2e-20 SSF54928 RNA-binding domain, RBD[313-448]T 9.6e-27 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL06-70-F02_2_ORF1 CRC64: DCF49282D8DD53B4 LENGTH: 55 aa
noIPR
unintegrated
unintegrated
seg[1-38]? NA seg segseg
SEQUENCE: RAFL06-70-F02_2_ORF2 CRC64: 29FEA77FA9C2A3CD LENGTH: 68 aa
noIPR
unintegrated
unintegrated
seg[45-57]? NA seg segseg
SEQUENCE: RAFL06-70-F02_2_ORF3 CRC64: C0FDE4B8600EEC36 LENGTH: 75 aa
noIPR
unintegrated
unintegrated
seg[13-20]? NA seg seg[28-35]? NA seg segseg
SEQUENCE: RAFL06-70-F02_2_ORF4 CRC64: 2E790DEF97FEE90B LENGTH: 51 aa
No hits reported.
SEQUENCE: RAFL06-70-F02_2_ORF5 CRC64: 71D04C4128185397 LENGTH: 53 aa
noIPR
unintegrated
unintegrated
seg[23-38]? NA seg segseg
SEQUENCE: RAFL06-70-F02_2_ORF6 CRC64: F975DBEE4C2ACC95 LENGTH: 89 aa
noIPR
unintegrated
unintegrated
seg[18-30]? NA seg seg[31-54]? NA seg segseg
SEQUENCE: RAFL06-70-F02_3_ORF2 CRC64: EFC7A8C3687DD8E9 LENGTH: 131 aa
noIPR
unintegrated
unintegrated
seg[86-101]? NA seg seg[106-128]? NA seg segseg
SEQUENCE: RAFL06-70-F02_3_ORF3 CRC64: 535F4ACF591B3481 LENGTH: 53 aa
No hits reported.
SEQUENCE: RAFL06-70-F02_4_ORF2 CRC64: 79A5D02BCBBA89EB LENGTH: 52 aa
No hits reported.
SEQUENCE: RAFL06-70-F02_4_ORF3 CRC64: 11E89AB05DA6526E LENGTH: 140 aa
noIPR
unintegrated
unintegrated
seg[48-130]? NA seg segseg
SEQUENCE: RAFL06-70-F02_5_ORF2 CRC64: 1737E2BF5F63367F LENGTH: 56 aa
No hits reported.
SEQUENCE: RAFL06-70-F02_5_ORF3 CRC64: BCDC5C5C15EB1927 LENGTH: 98 aa
noIPR
unintegrated
unintegrated
seg[16-23]? NA seg seg[37-47]? NA seg seg[59-74]? NA seg segseg
SEQUENCE: RAFL06-70-F02_6_ORF2 CRC64: 766204F2C90BD581 LENGTH: 105 aa
noIPR
unintegrated
unintegrated
seg[41-52]? NA seg segseg
SEQUENCE: RAFL06-70-F02_6_ORF3 CRC64: EA2CDDD4C83DE0DE LENGTH: 76 aa
No hits reported.
SEQUENCE: RAFL06-70-F02_6_ORF4 CRC64: 3208752D5B295930 LENGTH: 64 aa
No hits reported.
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science