InterPro Scan Result: RAFL07-16-B18

SEQUENCE: RAFL07-16-B18_1_ORF2 CRC64: A5A5BB404848F582 LENGTH: 555 aa
InterPro
IPR000943
Domain
RNA polymerase sigma-70 factor
PR00046[340-353]T 3.7e-18 PR00046 SIGMA70FCT[364-372]T 3.7e-18 PR00046 SIGMA70FCT[493-505]T 3.7e-18 PR00046 SIGMA70FCT[513-528]T 3.7e-18 PR00046 SIGMA70FCT[528-539]T 3.7e-18 PR00046 SIGMA70FCTSIGMA70FCT
PS00715[340-353]T NA PS00715 SIGMA70_1SIGMA70_1
InterPro
IPR007624
Domain
RNA polymerase sigma-70 region 3
PF04539[395-465]T 2.4e-12 PF04539 Sigma70_r3Sigma70_r3
InterPro
IPR007627
Domain
RNA polymerase sigma-70 region 2
PF04542[317-386]T 7.6e-17 PF04542 Sigma70_r2Sigma70_r2
InterPro
IPR007630
Domain
RNA polymerase sigma-70 region 4
PF04545[491-541]T 6.6e-11 PF04545 Sigma70_r4Sigma70_r4
InterPro
IPR011991
Domain
Winged helix-turn-helix transcription repressor DNA-binding
G3DSA:1.10.10.10[475-552]T 4e-12 G3DSA:1.10.10.10 no descriptionno description
InterPro
IPR013324
Domain
RNA polymerase sigma factor, region 3/4
SSF88659[387-444]T 1.1e-08 SSF88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors[449-554]T 1.9e-13 SSF88659 Sigma3 and sigma4 domains of RNA polymerase sigma factorsSigma3 and sigma4 domains of RNA polymerase sigma factors
InterPro
IPR013325
Domain
RNA polymerase sigma factor, region 2
SSF88946[233-386]T 8.7e-42 SSF88946 Sigma2 domain of RNA polymerase sigma factorsSigma2 domain of RNA polymerase sigma factors
InterPro
IPR014284
Domain
RNA polymerase sigma-70
TIGR02937[311-543]T 1.2e-16 TIGR02937 sigma70-ECF: RNA polymerase sigma factor,sigma70-ECF: RNA polymerase sigma factor,
noIPR
unintegrated
unintegrated
G3DSA:1.10.601.10[300-385]T 2.7e-32 G3DSA:1.10.601.10 no descriptionno description
seg[146-158]? NA seg segseg
SEQUENCE: RAFL07-16-B18_3_ORF1 CRC64: AE9A1C1A671B55E9 LENGTH: 56 aa
noIPR
unintegrated
unintegrated
seg[10-20]? NA seg segseg
SEQUENCE: RAFL07-16-B18_4_ORF2 CRC64: 1A131747F6BBD693 LENGTH: 52 aa
No hits reported.
SEQUENCE: RAFL07-16-B18_4_ORF3 CRC64: D97C2F4091592469 LENGTH: 59 aa
No hits reported.
SEQUENCE: RAFL07-16-B18_4_ORF4 CRC64: 6B0E81B5991BBBAF LENGTH: 53 aa
No hits reported.
SEQUENCE: RAFL07-16-B18_4_ORF5 CRC64: DACFAECDD8757F82 LENGTH: 64 aa
No hits reported.
SEQUENCE: RAFL07-16-B18_4_ORF6 CRC64: D53D488D0B69F509 LENGTH: 82 aa
noIPR
unintegrated
unintegrated
seg[61-81]? NA seg segseg
SEQUENCE: RAFL07-16-B18_5_ORF2 CRC64: 95A07E18676D76F5 LENGTH: 50 aa
No hits reported.
SEQUENCE: RAFL07-16-B18_5_ORF3 CRC64: 06BE2251E8296A1D LENGTH: 55 aa
noIPR
unintegrated
unintegrated
seg[34-51]? NA seg segseg
SEQUENCE: RAFL07-16-B18_6_ORF1 CRC64: CA9BE03086A6E57B LENGTH: 60 aa
noIPR
unintegrated
unintegrated
seg[11-31]? NA seg segseg
SEQUENCE: RAFL07-16-B18_6_ORF2 CRC64: 39E1E46A1D761454 LENGTH: 50 aa
No hits reported.
SEQUENCE: RAFL07-16-B18_6_ORF3 CRC64: 4901C836AA428BAC LENGTH: 51 aa
No hits reported.
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