InterPro Scan Result: RAFL07-16-J11

SEQUENCE: RAFL07-16-J11_1_ORF1 CRC64: 17E6AB12CCDA0C59 LENGTH: 57 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_1_ORF2 CRC64: 2D51C81AAD6F7085 LENGTH: 742 aa
InterPro
IPR001356
Domain
Homeobox
PF00046[521-558]T 6.5e-07 PF00046 HomeoboxHomeobox
SM00389[502-566]T 1.2e-09 SM00389 no descriptionno description
PS50071[499-562]T 12.568 PS50071 HOMEOBOX_2HOMEOBOX_2
InterPro
IPR006563
Domain
POX
PF07526[314-447]T 9.9e-52 PF07526 POXPOX
SM00574[310-448]T 3e-82 SM00574 no descriptionno description
InterPro
IPR009057
Domain
Homeodomain-like
SSF46689[500-577]T 3.5e-17 SSF46689 Homeodomain-likeHomeodomain-like
InterPro
IPR012287
Domain
Homeodomain-related
G3DSA:1.10.10.60[501-573]T 9.1e-25 G3DSA:1.10.10.60 no descriptionno description
noIPR
unintegrated
unintegrated
coil[564-592]? NA coil coiled-coilcoiled-coil
PTHR11850[492-660]T 5.6e-90 PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORSHOMEOBOX PROTEIN TRANSCRIPTION FACTORS
PTHR11850:SF14[492-660]T 5.6e-90 PTHR11850:SF14 BEL1 HOMEOTIC PROTEINBEL1 HOMEOTIC PROTEIN
seg[30-39]? NA seg seg[98-109]? NA seg seg[128-141]? NA seg seg[148-171]? NA seg seg[182-193]? NA seg seg[216-221]? NA seg seg[235-251]? NA seg seg[301-312]? NA seg seg[355-367]? NA seg seg[477-489]? NA seg seg[571-589]? NA seg seg[590-607]? NA seg seg[609-634]? NA seg seg[649-672]? NA seg segseg
SEQUENCE: RAFL07-16-J11_2_ORF2 CRC64: 1A211C0101CFACB8 LENGTH: 183 aa
InterPro
IPR000894
Domain
Ribulose bisphosphate carboxylase, small chain
PR00152[20-37]T 2.6e-75 PR00152 RUBISCOSMALL[47-65]T 2.6e-75 PR00152 RUBISCOSMALL[68-94]T 2.6e-75 PR00152 RUBISCOSMALL[96-111]T 2.6e-75 PR00152 RUBISCOSMALL[118-147]T 2.6e-75 PR00152 RUBISCOSMALL[152-178]T 2.6e-75 PR00152 RUBISCOSMALLRUBISCOSMALL
G3DSA:3.30.190.10[59-178]T 6.5e-56 G3DSA:3.30.190.10 no descriptionno description
PF00101[69-178]T 6.7e-42 PF00101 RuBisCO_smallRuBisCO_small
SSF55239[59-181]T 5.5e-54 SSF55239 RuBisCO, small subunitRuBisCO, small subunit
noIPR
unintegrated
unintegrated
PF12338[5-45]T 2.6e-19 PF12338 RbcSRbcS
seg[4-17]? NA seg segseg
SEQUENCE: RAFL07-16-J11_2_ORF3 CRC64: E64D58BE1CAB2343 LENGTH: 60 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_2_ORF4 CRC64: B197B207FC514433 LENGTH: 103 aa
noIPR
unintegrated
unintegrated
seg[2-12]? NA seg seg[36-50]? NA seg seg[68-73]? NA seg segseg
SEQUENCE: RAFL07-16-J11_2_ORF5 CRC64: 922AD1751D01D6FE LENGTH: 51 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_2_ORF6 CRC64: A093E95AA8A11A1E LENGTH: 56 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_2_ORF7 CRC64: 3F9FC41AD7CF7D08 LENGTH: 50 aa
noIPR
unintegrated
unintegrated
seg[1-22]? NA seg seg[37-50]? NA seg segseg
SEQUENCE: RAFL07-16-J11_3_ORF1 CRC64: 81CA9177CA8425F6 LENGTH: 147 aa
noIPR
unintegrated
unintegrated
seg[10-48]? NA seg seg[69-85]? NA seg segseg
SEQUENCE: RAFL07-16-J11_3_ORF2 CRC64: 9368BBF67CB1E2C4 LENGTH: 57 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_3_ORF3 CRC64: 1D23F124437AF75E LENGTH: 71 aa
noIPR
unintegrated
unintegrated
seg[29-39]? NA seg segseg
SEQUENCE: RAFL07-16-J11_3_ORF4 CRC64: 5406B0909711916F LENGTH: 68 aa
noIPR
unintegrated
unintegrated
seg[5-14]? NA seg seg[22-29]? NA seg seg[44-50]? NA seg segseg
SEQUENCE: RAFL07-16-J11_4_ORF2 CRC64: 99C4AD389646C506 LENGTH: 54 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_4_ORF3 CRC64: E7C7AC992A4E8477 LENGTH: 68 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_4_ORF4 CRC64: 357FDC522E31F952 LENGTH: 95 aa
noIPR
unintegrated
unintegrated
seg[16-24]? NA seg segseg
SEQUENCE: RAFL07-16-J11_4_ORF5 CRC64: 349D16D077BE465B LENGTH: 54 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_5_ORF2 CRC64: A074E822377B2020 LENGTH: 59 aa
noIPR
unintegrated
unintegrated
coil[21-42]? NA coil coiled-coilcoiled-coil
seg[33-47]? NA seg segseg
SEQUENCE: RAFL07-16-J11_5_ORF3 CRC64: 3668873690EE780E LENGTH: 52 aa
noIPR
unintegrated
unintegrated
seg[5-38]? NA seg segseg
SEQUENCE: RAFL07-16-J11_5_ORF4 CRC64: 0DB06F08B0332C05 LENGTH: 62 aa
noIPR
unintegrated
unintegrated
seg[26-43]? NA seg segseg
SEQUENCE: RAFL07-16-J11_5_ORF5 CRC64: B20FC733011088BB LENGTH: 74 aa
noIPR
unintegrated
unintegrated
seg[50-55]? NA seg segseg
SEQUENCE: RAFL07-16-J11_5_ORF6 CRC64: 757C3CE6127830F8 LENGTH: 59 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_5_ORF7 CRC64: 96575382C12AFFD2 LENGTH: 76 aa
noIPR
unintegrated
unintegrated
seg[42-53]? NA seg segseg
SEQUENCE: RAFL07-16-J11_5_ORF8 CRC64: A740D72AB616BCE8 LENGTH: 119 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_6_ORF2 CRC64: 7AF7D0B60440051D LENGTH: 54 aa
No hits reported.
SEQUENCE: RAFL07-16-J11_6_ORF3 CRC64: 528066D899FF3181 LENGTH: 56 aa
noIPR
unintegrated
unintegrated
seg[11-36]? NA seg seg[38-56]? NA seg segseg
SEQUENCE: RAFL07-16-J11_6_ORF4 CRC64: F00991A60BA13825 LENGTH: 89 aa
noIPR
unintegrated
unintegrated
seg[72-80]? NA seg segseg
SEQUENCE: RAFL07-16-J11_6_ORF5 CRC64: 9D9475A6DCEDE536 LENGTH: 64 aa
No hits reported.
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