InterPro Scan Result: RAFL08-10-P05

SEQUENCE: RAFL08-10-P05_1_ORF2 CRC64: 72149AA50FDD9FD2 LENGTH: 54 aa
noIPR
unintegrated
unintegrated
seg[10-34]? NA seg segseg
SEQUENCE: RAFL08-10-P05_1_ORF3 CRC64: 1CFB831AFE5BBC4D LENGTH: 314 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[219-258]T 6.6e-08 SM00320 no description[264-303]T 3e-07 SM00320 no descriptionno description
InterPro
IPR006594
Domain
LisH dimerisation motif
PS50896[22-54]T 8.631 PS50896 LISHLISH
InterPro
IPR006595
Domain
CTLH, C-terminal LisH motif
SM00668[55-113]T 7.8e-09 SM00668 no descriptionno description
PS50897[55-113]T 11.444 PS50897 CTLHCTLH
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[225-306]T 2.1e-21 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[223-306]T 3.1e-20 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[226-312]T 18.985 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[221-258]T 8.3e-09 PF00400 WD40[266-303]T 3.2e-06 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[226-267]T 11.845 PS50082 WD_REPEATS_2[271-306]T 12.547 PS50082 WD_REPEATS_2WD_REPEATS_2
noIPR
unintegrated
unintegrated
PTHR22838[83-306]T 1.5e-91 PTHR22838 WD REPEAT PROTEIN 26-RELATEDWD REPEAT PROTEIN 26-RELATED
seg[154-169]? NA seg segseg
SEQUENCE: RAFL08-10-P05_2_ORF2 CRC64: 9125ADC8D648EF65 LENGTH: 62 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_2_ORF3 CRC64: E60FDD2639E77714 LENGTH: 65 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_2_ORF4 CRC64: 280399780E315AEE LENGTH: 55 aa
noIPR
unintegrated
unintegrated
seg[23-41]? NA seg segseg
SEQUENCE: RAFL08-10-P05_3_ORF2 CRC64: 11D4187DA521080A LENGTH: 193 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[15-55]T 16 SM00320 no description[57-95]T 1.2 SM00320 no description[99-141]T 0.048 SM00320 no description[144-184]T 1.3e-10 SM00320 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[2-183]T 1.1e-34 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[9-183]T 5.7e-31 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[63-193]T 20.804 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019775
Conserved_site
WD40 repeat, conserved site
PS00678[128-142]T NA PS00678 WD_REPEATS_1WD_REPEATS_1
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[103-141]T 0.0013 PF00400 WD40[146-183]T 2e-12 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[124-150]T 10.074 PS50082 WD_REPEATS_2[151-183]T 14.251 PS50082 WD_REPEATS_2WD_REPEATS_2
noIPR
unintegrated
unintegrated
PTHR22838[2-189]T 2.3e-71 PTHR22838 WD REPEAT PROTEIN 26-RELATEDWD REPEAT PROTEIN 26-RELATED
SEQUENCE: RAFL08-10-P05_4_ORF2 CRC64: 4D6D7D5A7AA49146 LENGTH: 54 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_4_ORF3 CRC64: B600FDA188508328 LENGTH: 51 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_4_ORF4 CRC64: 4D2B9190063F6D6B LENGTH: 63 aa
noIPR
unintegrated
unintegrated
seg[50-56]? NA seg segseg
SEQUENCE: RAFL08-10-P05_5_ORF2 CRC64: 1CA80A1015F83721 LENGTH: 113 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_5_ORF3 CRC64: AFF7B0A2AD322151 LENGTH: 63 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_5_ORF4 CRC64: 7EF8F546245764E2 LENGTH: 76 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_5_ORF5 CRC64: EF1C0D7EECC99DE8 LENGTH: 58 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_5_ORF6 CRC64: FFBB7EB102AD4B74 LENGTH: 71 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_6_ORF2 CRC64: 371D44C5F49C1080 LENGTH: 90 aa
noIPR
unintegrated
unintegrated
seg[74-88]? NA seg segseg
SEQUENCE: RAFL08-10-P05_6_ORF3 CRC64: 0F00CDD22C29667D LENGTH: 167 aa
noIPR
unintegrated
unintegrated
seg[106-121]? NA seg segseg
SEQUENCE: RAFL08-10-P05_6_ORF4 CRC64: 4AB40164A7DD7403 LENGTH: 57 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_6_ORF5 CRC64: 4EDE6A0FA0FD21E3 LENGTH: 100 aa
No hits reported.
SEQUENCE: RAFL08-10-P05_6_ORF6 CRC64: C242200A32D9EBD0 LENGTH: 61 aa
No hits reported.
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science