InterPro Scan Result: RAFL09-17-I01

SEQUENCE: RAFL09-17-I01_1_ORF2 CRC64: 529940CA7DEC8A57 LENGTH: 65 aa
noIPR
unintegrated
unintegrated
seg[16-36]? NA seg segseg
SEQUENCE: RAFL09-17-I01_1_ORF3 CRC64: 4A3673BB4FECB00A LENGTH: 60 aa
noIPR
unintegrated
unintegrated
seg[30-44]? NA seg segseg
SEQUENCE: RAFL09-17-I01_1_ORF4 CRC64: D221172469E3B3D8 LENGTH: 56 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_2_ORF2 CRC64: 88A60822170EC9CD LENGTH: 650 aa
InterPro
IPR004087
Domain
K Homology
SM00322[48-118]T 2.3e-08 SM00322 no description[154-232]T 2.9e-11 SM00322 no description[321-398]T 3.4e-08 SM00322 no description[403-478]T 1.6e-12 SM00322 no description[578-648]T 2.2e-09 SM00322 no descriptionno description
InterPro
IPR004088
Domain
K Homology, type 1
PS50084[49-117]T 12.014 PS50084 KH_TYPE_1[155-227]T 13.376 PS50084 KH_TYPE_1[322-390]T 12.789 PS50084 KH_TYPE_1[404-473]T 15.472 PS50084 KH_TYPE_1[579-643]T 15.158 PS50084 KH_TYPE_1KH_TYPE_1
InterPro
IPR018111
Domain
K Homology, type 1, subgroup
PF00013[52-101]T 6.1e-11 PF00013 KH_1[158-226]T 1e-14 PF00013 KH_1[325-376]T 2e-10 PF00013 KH_1[407-471]T 7.5e-13 PF00013 KH_1[581-641]T 1.8e-12 PF00013 KH_1KH_1
noIPR
unintegrated
unintegrated
G3DSA:3.30.1370.10[37-99]T 3.6e-09 G3DSA:3.30.1370.10 no description[154-234]T 2e-08 G3DSA:3.30.1370.10 no description[310-378]T 2.9e-06 G3DSA:3.30.1370.10 no description[403-480]T 1.1e-12 G3DSA:3.30.1370.10 no description[578-647]T 5.8e-12 G3DSA:3.30.1370.10 no descriptionno description
PTHR10288[59-642]T 2.8e-229 PTHR10288 RNA-BINDING PROTEIN RELATEDRNA-BINDING PROTEIN RELATED
PTHR10288:SF55[59-642]T 2.8e-229 PTHR10288:SF55 RNA-BINDING PROTEIN RELATEDRNA-BINDING PROTEIN RELATED
seg[16-32]? NA seg seg[168-183]? NA seg seg[189-198]? NA seg seg[412-432]? NA seg seg[474-485]? NA seg seg[499-509]? NA seg seg[537-548]? NA seg seg[561-576]? NA seg segseg
SSF54791[37-100]T 4.8e-13 SSF54791 Eukaryotic type KH-domain (KH-domain type I)[143-239]T 6.7e-13 SSF54791 Eukaryotic type KH-domain (KH-domain type I)[321-401]T 2.9e-10 SSF54791 Eukaryotic type KH-domain (KH-domain type I)[403-491]T 1.5e-15 SSF54791 Eukaryotic type KH-domain (KH-domain type I)[567-649]T 5.8e-15 SSF54791 Eukaryotic type KH-domain (KH-domain type I)Eukaryotic type KH-domain (KH-domain type I)
SEQUENCE: RAFL09-17-I01_2_ORF3 CRC64: 6E72A2CA715FC7D4 LENGTH: 78 aa
noIPR
unintegrated
unintegrated
seg[74-78]? NA seg segseg
SEQUENCE: RAFL09-17-I01_3_ORF2 CRC64: DFB1B1D11A834152 LENGTH: 73 aa
noIPR
unintegrated
unintegrated
seg[29-35]? NA seg segseg
SEQUENCE: RAFL09-17-I01_3_ORF3 CRC64: 8C4CF6BB2B3E56C5 LENGTH: 50 aa
noIPR
unintegrated
unintegrated
seg[3-32]? NA seg segseg
SEQUENCE: RAFL09-17-I01_3_ORF4 CRC64: AA9B33BE847A9BD1 LENGTH: 70 aa
noIPR
unintegrated
unintegrated
seg[48-57]? NA seg segseg
SEQUENCE: RAFL09-17-I01_3_ORF5 CRC64: A813A34FB95B5CCE LENGTH: 64 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_3_ORF6 CRC64: E12E25750D381BEE LENGTH: 65 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_4_ORF2 CRC64: 6486C5F61F850626 LENGTH: 79 aa
noIPR
unintegrated
unintegrated
seg[51-67]? NA seg segseg
SEQUENCE: RAFL09-17-I01_4_ORF3 CRC64: 99BF9205815611F7 LENGTH: 60 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_4_ORF4 CRC64: 8AC562A427F4596A LENGTH: 66 aa
noIPR
unintegrated
unintegrated
seg[43-61]? NA seg segseg
SEQUENCE: RAFL09-17-I01_5_ORF2 CRC64: A8052C11155FA2A5 LENGTH: 59 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_5_ORF3 CRC64: A63CECA57410A05C LENGTH: 63 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_5_ORF4 CRC64: B70D0421956CDFBA LENGTH: 56 aa
No hits reported.
SEQUENCE: RAFL09-17-I01_5_ORF5 CRC64: 96F9A9F9FF0F2410 LENGTH: 105 aa
noIPR
unintegrated
unintegrated
seg[76-105]? NA seg segseg
SEQUENCE: RAFL09-17-I01_5_ORF6 CRC64: C108FAD0FF47CAB3 LENGTH: 85 aa
noIPR
unintegrated
unintegrated
seg[28-39]? NA seg segseg
SEQUENCE: RAFL09-17-I01_5_ORF7 CRC64: 6C2578E6BAB050AC LENGTH: 63 aa
noIPR
unintegrated
unintegrated
seg[23-42]? NA seg segseg
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science