InterPro Scan Result: RAFL09-24-E12

SEQUENCE: RAFL09-24-E12_2_ORF2 CRC64: 70D143B65060EF7F LENGTH: 147 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[1-42]T 60 SM00320 no description[45-84]T 2.3e-05 SM00320 no description[87-125]T 5.5e-05 SM00320 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[1-129]T 4.5e-25 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[7-146]T 3.2e-24 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[7-134]T 14.292 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019775
Conserved_site
WD40 repeat, conserved site
PS00678[71-85]T NA PS00678 WD_REPEATS_1WD_REPEATS_1
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[6-36]T 0.005 PF00400 WD40[49-84]T 1.5e-06 PF00400 WD40[95-125]T 0.00011 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[52-93]T 11.210 PS50082 WD_REPEATS_2WD_REPEATS_2
noIPR
unintegrated
unintegrated
PTHR19877[2-147]T 6e-94 PTHR19877 WD40 REPEAT PROTEINWD40 REPEAT PROTEIN
PTHR19877:SF2[2-147]T 6e-94 PTHR19877:SF2 SERINE-THREONINE KINASE RECEPTOR-ASSOCIATED PROTEIN (STRAP)SERINE-THREONINE KINASE RECEPTOR-ASSOCIATED PROTEIN (STRAP)
SEQUENCE: RAFL09-24-E12_2_ORF3 CRC64: 1369C5EDE28A8FA8 LENGTH: 185 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[24-61]T 0.0033 SM00320 no description[64-103]T 2.2e+02 SM00320 no description[106-145]T 1.8e-05 SM00320 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[2-144]T 4.8e-33 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[2-144]T 1.6e-28 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[1-154]T 18.220 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[28-61]T 0.02 PF00400 WD40[112-144]T 1.7e-07 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[1-30]T 9.840 PS50082 WD_REPEATS_2[113-144]T 13.349 PS50082 WD_REPEATS_2WD_REPEATS_2
noIPR
unintegrated
unintegrated
PTHR19877[5-166]T 3.2e-68 PTHR19877 WD40 REPEAT PROTEINWD40 REPEAT PROTEIN
PTHR19877:SF2[5-166]T 3.2e-68 PTHR19877:SF2 SERINE-THREONINE KINASE RECEPTOR-ASSOCIATED PROTEIN (STRAP)SERINE-THREONINE KINASE RECEPTOR-ASSOCIATED PROTEIN (STRAP)
SEQUENCE: RAFL09-24-E12_3_ORF2 CRC64: 11A0EB8D09084AA0 LENGTH: 63 aa
noIPR
unintegrated
unintegrated
seg[6-18]? NA seg segseg
SEQUENCE: RAFL09-24-E12_3_ORF3 CRC64: 517024E9F83F7840 LENGTH: 54 aa
No hits reported.
SEQUENCE: RAFL09-24-E12_4_ORF2 CRC64: 8A36ED5723B1DF34 LENGTH: 77 aa
noIPR
unintegrated
unintegrated
seg[16-32]? NA seg segseg
SEQUENCE: RAFL09-24-E12_4_ORF3 CRC64: 63689FEC5F1B6727 LENGTH: 90 aa
No hits reported.
SEQUENCE: RAFL09-24-E12_5_ORF2 CRC64: ADA8E9D4DEE9E2C1 LENGTH: 99 aa
No hits reported.
SEQUENCE: RAFL09-24-E12_5_ORF3 CRC64: 677E4E7302F63A48 LENGTH: 67 aa
No hits reported.
SEQUENCE: RAFL09-24-E12_6_ORF2 CRC64: 362EB9003F93CEEC LENGTH: 50 aa
No hits reported.
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science