InterPro Scan Result: RAFL09-73-P16

SEQUENCE: RAFL09-73-P16_1_ORF2 CRC64: 2D228465701600CE LENGTH: 64 aa
No hits reported.
SEQUENCE: RAFL09-73-P16_1_ORF3 CRC64: FF4B4CB695439C7B LENGTH: 51 aa
No hits reported.
SEQUENCE: RAFL09-73-P16_3_ORF2 CRC64: 7B50264E26F2D028 LENGTH: 476 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[59-98]T 0.11 SM00320 no description[113-158]T 0.00016 SM00320 no description[205-245]T 1.2e-07 SM00320 no description[324-366]T 5.5e-05 SM00320 no description[414-453]T 1e-05 SM00320 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[48-473]T 8e-52 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[68-452]T 7.7e-49 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[65-462]T 24.178 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019775
Conserved_site
WD40 repeat, conserved site
PS00678[232-246]T NA PS00678 WD_REPEATS_1[353-367]T NA PS00678 WD_REPEATS_1WD_REPEATS_1
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[67-98]T 0.073 PF00400 WD40[123-158]T 0.00017 PF00400 WD40[210-245]T 4.6e-07 PF00400 WD40[335-366]T 2.6e-05 PF00400 WD40[420-453]T 3.4e-05 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[125-167]T 11.110 PS50082 WD_REPEATS_2[212-254]T 13.182 PS50082 WD_REPEATS_2[334-375]T 14.886 PS50082 WD_REPEATS_2[421-453]T 11.377 PS50082 WD_REPEATS_2WD_REPEATS_2
InterPro
IPR020472
Region
G-protein beta WD-40 repeat, region
PR00320[145-159]T 2.9e-06 PR00320 GPROTEINBRPT[232-246]T 2.9e-06 PR00320 GPROTEINBRPT[353-367]T 2.9e-06 PR00320 GPROTEINBRPTGPROTEINBRPT
noIPR
unintegrated
unintegrated
PTHR22850[34-474]T 2.6e-237 PTHR22850 WD40 REPEAT FAMILYWD40 REPEAT FAMILY
PTHR22850:SF2[34-474]T 2.6e-237 PTHR22850:SF2 COCKAYNE SYNDROME WD-REPEAT PROTEIN CSA (DNA EXCISION REPAIR PROTEIN ERCC-8)COCKAYNE SYNDROME WD-REPEAT PROTEIN CSA (DNA EXCISION REPAIR PROTEIN ERCC-8)
seg[5-17]? NA seg seg[297-318]? NA seg segseg
SEQUENCE: RAFL09-73-P16_4_ORF2 CRC64: CE419835F0D8BFD6 LENGTH: 67 aa
noIPR
unintegrated
unintegrated
seg[30-47]? NA seg segseg
SEQUENCE: RAFL09-73-P16_4_ORF3 CRC64: B842BDA71F844C0A LENGTH: 62 aa
No hits reported.
SEQUENCE: RAFL09-73-P16_5_ORF2 CRC64: AF9BA0691F5CADC9 LENGTH: 67 aa
noIPR
unintegrated
unintegrated
seg[28-48]? NA seg segseg
SEQUENCE: RAFL09-73-P16_5_ORF3 CRC64: 17677E0AA3446F14 LENGTH: 86 aa
No hits reported.
SEQUENCE: RAFL09-73-P16_5_ORF4 CRC64: F87F7ABCA0827AA2 LENGTH: 66 aa
No hits reported.
SEQUENCE: RAFL09-73-P16_5_ORF5 CRC64: BC41CBFBCBF1C20A LENGTH: 57 aa
noIPR
unintegrated
unintegrated
seg[33-49]? NA seg segseg
SEQUENCE: RAFL09-73-P16_6_ORF2 CRC64: 180A4E7AEF1606C6 LENGTH: 68 aa
No hits reported.
SEQUENCE: RAFL09-73-P16_6_ORF3 CRC64: A814741F833DCF44 LENGTH: 100 aa
noIPR
unintegrated
unintegrated
seg[63-73]? NA seg segseg
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science