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Mutant Lines
11-0011-1

11-0011-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 60475 [Map]; Strand: w
  - AT4G00150.1 - [+] show detail - GRAS family transcription factor
    Distance: -1189; Region: intergenic
  - AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
    Distance: -2935; Region: intergenic
Flanking Genome Sequence: 11-0011-1 - 5-prime edge
```
GTATTCATGA TAATGAAAAA GCATTTACTT TTCTATGCAA ACCAATTCAT 
TAGTATAAAC AATATCAAAG AAAAAAAAAA GGNTNAACNA NNTNNGANTN 
NGNANNTNTN TTTTNNNNGG GAAANACCNG CCCGGGGNGG GGACCNCCCG 
GGNCCCTNNA AA
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 60359 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -1073; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -3051; Region: intergenic

ATGAATACAT GATAATGAAA CTGTCGCCAT TCATTGCAAA ATTGGTCCGA 
TTTTAATTTG TCTTCATCAA TTACCCACCT CTCTTTCTTG TTGTTTTTTC 
TGATTGCTTT ATTCATTTAT TTATTATAGG GTTTTCCATT GGTAGATATA 
TTTATATATG TATATATATG GTGATTGGTG ACTTCCATTG TCTGCTCAAT 
AAAGGACTAC CACTCGTTCT TTCTCAATCT CTCGTGCATT TAACTTGTCA 
CAGAAGAAAC ATCATTCACA GATCTTCAAT CACCTTTTTT CCTTCAAACG 
AAAAGATGTA CCAAAGAAAG TATGTTTTTA TATACACGTA AATATATATA 
GAACTCCTTC TTTGTTATAA GTAGTACATG AATGTTTCAG ATAATGACGA 
TCATTCGTAT CTCGTTAAGT TAAAACAACA AAAACAAAAC AGATATTTTT 
GATGTAACTC CAATATATAC ATAGTTTTTT TTTCCACTTT GTTNANATTT 
ATAAATTTAN ATTATGNCCG TNNCAAAAAA AAAAAAAAAA ANGGGGGNCC 
CCCNTNNTTN TNCCCCCCCN CCNNTGNGGG GTTNNCCCCC CACNGGAGNG 
GGGNNANNGG GGGGGNNTNT NNAAAAAANN AANNAAGNNN NNNGCCGGGG 
GGGGAANNA

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR