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11-0026-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8153311 [Map]; Strand: w
      • AT2G18820.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-0026-1 - 5-prime edge 
    TTCCCTCTAC ATCCACTCTC TTTCGGTTCT CTAAGAAACT GAAGGAACTT 
    AAGCCCATAC TCAAGGACTT AAGCCGTAAT AATCTATCAG ACTTGACACG 
    TAGAGCTACT TACGCCTATG AGGAGCTTTG TAGATGCCAA ACCAAATCTC 
    TAACTACTCT AAATCCTCAT GATATTGTGG ATGAATCTTT GGCTTTTGAA 
    AGATGGGAAA AGGTGGCTTG ACTAGAAGAA GAGTTTTTGC GTCAAAGATC 
    TAAATTGCAT TGGCTACAAG TTGGAGATAA TATACTAAGG CATTCTACAA 
    TGTGTTAAAG GAGAGACACT TGTTAAATGC CATTCATGAG GTAATGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8153195 [Map]; Strand: w
      • AT2G18820.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-0026-1 - 3-prime edge 
    AGAGGGAAAG AGTTCTGTTG TATTCTTCAA GAAATCTTCA ACTTTTGGCA 
    TAAACTCTGG GTGAGCAGCA ATAACATTAG TGAACTTAAA AGGACCTTTA 
    GGCTTCTGAA TTGCAGATCT GAGATGAAAT CTACCCCGAA GATGGTCTGA 
    GCAACCACCA GAGTCCATGA TACAATAGGA ATGAGGGTAG GCACTATTGT 
    ATTCTGGATT CAAAAGCACT CTATCTAATT TTTTGCAGAT CAGTCCTTCA 
    TTTCGCTTAT TTCCCCATGT GAACAACGGA CCATGGGTTC TCATATCCTC 
    CAAAGAACAA TATCTCACCA CAATCTGAAA GTCTCTCATA CCCGGCGTAA 
    CCATAGGCGA TACTGCATAG CTTGAATGCT CTTCCATCTT AAGAGTTTCA 
    TTAAAATCAC CAAACAAGAG CCATGGCTTA TTTCGAAAAG CCACTGAATT 
    TTGGAGATTA TGAAGATCCT GCCAAAGCT

AT2G18820.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 2.7e-38 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR