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Mutant Lines
11-0040-1

11-0040-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23381631 [Map]; Strand: c
  - AT3G63290.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -14; Region: promoter
  - AT3G63290.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -53; Region: promoter
Flanking Genome Sequence: 11-0040-1 - 5-prime edge
```
TTCATAAGCA AAGCTCCTTT CACTATCACA GTGATAGTAT CACTTTCTCC 
CGATTTCCTC GTTCTTCGCT AAATTCTCTC ACAAAGTTTG TTTATTGATA 
AGAAGAACCC CGCTTTTTTC TCAACCTCTA CGAAACGACC CAAACATTTT 
CCACCAAATT CAAAATGTCC AAACAAATCC ACTAACGAAT TGGCCCAACA 
AGGCCCAAAC TGCAAGCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 23381747 [Map]; Strand: c
- AT3G63290.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT3G63290.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 0; Region: exon1 (5UTR)

CTTATGAAGA GAGAAGAAAT GGCAGAAACA GAGATTCTTG AGCCCTATCA 
ACTGTCGTTC TCGGATCTTC TTTTGTCCTC TCGTAATCGC TCTCAATGGA 
TCTCGAAAAA TGTGATGGAC GCTCTTGGCC CCACCGGTCC TGGTCTCCTT 
TGTATCACCG GCGTTCTTGG CTCCGCCTTT CTCCGCCGTA AACTCCTTCC 
TATGGCTCGG AAGCTGGCTC TGCTCGATCC GGACAAGCGG AAACTCATTC 
TCATGGTAAC CCCCCGGCAA TTTTTCAAGA TTTCCATTAA TCCAAGTTGT 
ATATCTGGTG CTTTGTTCTC AAGATTGAAA CTTTGATTAG TGTTAGTTGG 
TTCATGAGTG TTACTGATTC GGTGTGTTTA CTGCCAAAAG GAGCACCACT 
TGGGTAGCGA CGTTCCTCTC AAGAATCCAG AACGAGATGT CTCCTCTTTT 
GCAATGCAGC TCAATTATGA AAGAACAACT TATAAATCCT CACTGGGAAA 
GCTGTGGTTC GATGAGGCTG GATCAAAACT GGACTTGCAG GAGGATGATT 
GATGATGCTT TCACAAATCT TGGTGGTGCT TTTAAAGAAC TCGGGTTCTG 
CATGANGGAG TTTGGGCTTG TCCATANCTC GTCTATGCGA CAGGGANATT 
GGCGGANGCT TGCTGGAGGA GAGCCTNCTG GATTCTTTGC CAGCCAAGGG 
ACGNCTCATA ANATTNCCNC TCCG

AT3G63290.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G13400.1); Has 166 Blast hits to 166 proteins in 65 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 62; Plants - 68; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63290.2

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G13400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR