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11-0047-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
whole plant flowering stage (PO:0007016)
  • late (PATO:0000693)
    (Flowering & Growth::late flowering)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2128668 [Map]; Strand: w
      • AT5G06850.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0047-1 - 3-prime edge 
    GTGACACCAG CTAAAGATGA AGTCATGGGG AGGCTGATCT CACCTTTGAG 
    CGTATTTGAG AAAAGGTTAG ATCACAGAGC TGTTCATTCC AAATGGTACA 
    ACCTCGAAAA GTTTGGGTTT GGGGCTCTGG AAGGAGACAA GAGACACGAG 
    CTCAAGTTCT CCAGCCGAAT CCACCTACGA GTTTGCCTTG AAGGAGGTTA 
    CCATGTAATG GACGAGTCAA CTCTGTACAT CAGTGACGTG AAACCTACGG 
    CAAGGCAACT ATGGAAGTCT CCTATTGGCA TCCTTGAAGT AGGAATCTTG 
    AGTGCTCAAG GGCTATCGCC TATGAAAACA AAAGACGGTA AAGCGACAAC 
    AGATCCGTAT TGTGTTGCCA AGTACGGTCA AAAATGGGTG AGAACAAGAA 
    CCATCATTGA CAGCTCTAGC CCTAAATGGA ATGAGCAATA CACATGGGAA 
    GTGTATGATC CTTGTACAGT TATCACACTG GGAGTTTTCG ATAACTGTCA 
    CCTTGGCGGA AGTGAGAAAT CGAACAGTGG AGCCAAAGTG GATTCGAGAA 
    TCGGGAAGGT AAGGATC

AT5G06850.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT5G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR