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11-0053-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22317950 [Map]; Strand: c
      • AT3G60380.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0053-1 - 5-prime edge 
    CTCCCAGGCG TGCGTCACAT TCTCGGCATT ATAGTGATGG TTCCTTGTTA 
    GAGGAAGATG TAAGGCGGGG GTTTGAAAAT GAGTTGGAGG GGAGTAAAGT 
    CAGAGGCAGA AAAGCAGAAT TCTTCAGTAA GAAGGAACGG GGATCTAAAT 
    CACTTAATTT GGCAGCTGAA AGTTCCCGGA GAGGGAACAA GTCTCGCAGA 
    TCCTATCCTC CTGAGTCTAT CTCATCTCCC GTTGGTGGTG CTGATGACTC 
    CACAACTAGA AGACAAGATC

AT3G60380.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink).
Link
InterPro Scan - TAIR