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Mutant Lines
11-0056-1

11-0056-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 25575517 [Map]; Strand: c
- AT1G68240.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: intron3 (CDS)
- AT1G68240.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: intron3 (CDS)

TNACCNCGAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGNATTTTCC 
CATCCTACTT TCATCCGCAT TAAACTATAT CTAATTTAAT TTANNTACTT 
GTATCCATTA NAGNATATAT GTTCTTATGT GTTATGTGGA TGTGGNCCAA 
GNTATGTCAA TGGCNTACAC ANCAACTCCG GATNACACAC CACCATNTNN 
ATGCNGCNGC TNAANCNCCA NGTNTGTNTC CNNGGGGCNA TNANACACCN 
NGANNANCCA ANNATNCCTN NGNANNNCNN NACCNATNNC CNGCGNNNTC 
CNNAAGANAN ANNANTTNCN CNNNNNNCCT CNNNNCNTCN CNNNATNANG 
GNGNTGGNGT NNCGNNTANN TTCNCNNGTA TANGNAACAN TNCCGNCNTT 
CNAAACNNNA TCCNGANNNT NNCTNNANNN AGNGAGGCNN TCNACGNACC 
NNNCNGTGNN TNNNCACGAN CGCNGACCNN AAAGAANNNC TCNNNNNTAN 
NNNANANAAN NNNNCTNNNA NANGNGGACG NNCCGCCNNN NCCNCCTTNC 
NTTATNTCNA TNATNAATGT NTTTNNANAT NNATGTGTTN TTNTAGGAGA 
NANCNNCANA TNGGANCNCA GNCNNCNCNN NNNTTGCNGT TNNNNGNTCA 
CNNGTAGNNA NANAGGNGNG NNANCCTNNC NNGCNGNANT TNTCANCANN 
NCNNNTGATA NTACTNNTNG NNNNNGCNAC NNATANAGTN TTNATCNNAN 
NCCGANANTT NNANTAGANG NATNNANGNA NCGNNNCNTN NNTNAACNCN 
NNCTN

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 25575574 [Map]; Strand: c
  - AT1G68240.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon3 (CDS)
  - AT1G68240.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 11-0056-1 - 3-prime edge
```
CTTACATCTA CTTGATATTT CAAACTTTTA ATGTATTCAA TGATGTTTTC 
AAGCT
```

AT1G68240.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 1 (TAIR:AT2G46970.1); Has 1036 Blast hits to 1030 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G68240.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 1 (TAIR:AT2G46970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR