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11-0060-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26802243 [Map]; Strand: w
      • AT1G71040.1 - [+] show detail - Cupredoxin superfamily protein
        Distance: -1921; Region: intergenic
      • AT1G71050.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 910; Region: intergenic
    Flanking Genome Sequence: 11-0060-1 - 3-prime edge
    ACTGGGAGAT TTTATTCTTG TACAACTCAA AACAAATTAA TGCCTCACGT 
    AAAACAAACA CCTGTTTAAT C

AT1G71040.1

Model type
Protein coding
Short Description
Cupredoxin superfamily protein
Curator Summary
Encodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.
Computational Description
Low Phosphate Root2 (LPR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cellular response to phosphate starvation, meristem maintenance; LOCATED IN: cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G23010.1); Has 2992 Blast hits to 2635 proteins in 791 species: Archae - 14; Bacteria - 2507; Metazoa - 11; Fungi - 66; Plants - 272; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G71050.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1285 Blast hits to 1219 proteins in 68 species: Archae - 2; Bacteria - 24; Metazoa - 2; Fungi - 25; Plants - 1232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR