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11-0069-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4866409 [Map]; Strand: w
      • AT1G14240.2 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G14240.1 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G14240.3 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G14240.4 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-0069-1 - 3-prime edge
    CCNGNAGCCG GTGCGNGCTG ANACACCAGC TGTGGGCNGN ACATNTGCCC 
    TGNNNTNTAT CACTAACANC TTCTGACCAT ATACCACAGT TGAAGTCTAA
    AAATATGTTA CAAAGTCAAC ATCTAGATTC AGATCCAAAT GTAGTATAGT
    TCTGTTGTTG TTAGTTTCTT AATCCGGACG TACATCTAAA GTCAACATCA
    AGATTCAGAT CTAGATGCAG TATAGTTCGG TTGTTGTTAG TTTCTTAATC
    CGGAATTGTT CGTTTTTCAA ACCAATTTTT GCATCAAAAA TGTTCGTTTC
    AAATTTGTTA AAAAAATCTA AACCCAATCT TGAATCATCA AGCGACAAAA
    AACGTCTTAA ATTACAAAAT TTGTGATGAA AATTATATCA AAAAAAAAAA
    GNTCAANTNN TTTTTTTTTG CCAAAATTGG ACGGAAAATC CCNACNTTTA
    TACNANAGAA AANNAAAAAN CCACCNTTTT TNANNNNAGA NGTTNNCNTG
    GCCTNNCCTN NATCTTNCAA CGGAGNNAAN CNTAANNTNA ACNTNNCCCA
    AAANCNCCGG NCNTNGATNA AAAATCCCNN GGTGNTTCCC AANGTGGTTC
    ANTTTNCCAG ANNGAACNAN GNATGNGNAN TTNNGCGNGN NTTTNCGNAA
    NTTTTNGCTT TTTNNATNNA NTCGTNGANG NNATTNNNCA AAGGNTANTA
    GTGTNCNNNA ANTNTGNANA NAGGNNCAAA TNNGNTTNAN GNAANTATNA
    TCACNCNNNC AG

AT1G14240.1

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 1471 Blast hits to 1463 proteins in 237 species: Archae - 0; Bacteria - 39; Metazoa - 609; Fungi - 317; Plants - 332; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14240.2

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 1471 Blast hits to 1463 proteins in 237 species: Archae - 0; Bacteria - 39; Metazoa - 609; Fungi - 317; Plants - 332; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14240.3

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14240.4

Model type
Protein coding
Short Description
GDA1/CD39 nucleoside phosphatase family protein
Computational Description
GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR