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11-0074-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16801818 [Map]; Strand: c
      • AT4G35310.1 - [+] show detail - calmodulin-domain protein kinase 5
        Distance: -169; Region: promoter
    Flanking Genome Sequence: 11-0074-1 - 5-prime edge
    ATGGTGTTTT ATTTTACGGC GGCGATTGAG CGAAGAAAGG TCTTTTATTA 
    GTGCTC
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16801934 [Map]; Strand: c
      • AT4G35310.1 - [+] show detail - calmodulin-domain protein kinase 5
        Distance: -53; Region: promoter
    Flanking Genome Sequence: 11-0074-1 - 3-prime edge
    AACACCATCA CATTCTCATC CAACGAATCT AATCTATCCG ACCAAACCAA 
    AGCTCTTAAA AAATCTATTT TTATTCTTAC TTCAATCTCT GAAATAAATA
    AACATAAAAT ATTGTAGCTT TCCTTTGTTG TTCGACNTTT TCTCTTTTGT
    CTCCCCTAAA TTTAGTTTCT CCTTTTAAGT CAGATTCCTT CCTAATCCCA
    TTCTTTCAGT CTTCTCTTTC GCCCTTCTGA GTTCAACAAC TGGTAACTAG
    ATCCTCTTTT TGCTTTACTT CATTCTCTGT TTTGTTATTC CTTTAAAAGA
    TCCATCGAAA CTTCTTAGCT CTTTGTCTTT TTTTTGGTTA TTTTGACTCT
    TTGATCTGAT GTGGGTTTTG CGTCTTTCTT TACTTGNGGT ATTGTTAAAG
    TTCGTTACTT TGTTCTCGTT TAGCTTCTTG TATTTGGTCT AATTTAAGTC
    TTTTGACTTT TGACAGTGTT ATCTCTATGA ACAGTTCCTT TGATGAAGAA
    CACAAAGTGA AAGTTGCTGT CTTTATAACC AGGATTTGGT AATTCCCATT
    GTTTCATGGG CAATTCTTGC CGTGGATCTT TCAAAGGACA AACTCGACGA
    AGGCGATAAC AATAAGCCTG AAGATACTCT AAAACCTCTA CCACCAACTT
    GNNTTCTAAT TCCGACCATT CACCGAACGC TGCAGACATC ATTGCTCAAG
    AATACCCACC CCGGGCCGG

AT4G35310.1

Model type
Protein coding
Short Description
calmodulin-domain protein kinase 5
Curator Summary
calmodulin-domain protein kinase CDPK isoform 5 (CPK5)
Computational Description
calmodulin-domain protein kinase 5 (CPK5); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR