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11-0079-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2268368 [Map]; Strand: c
      • AT5G07220.1 - [+] show detail - BCL-2-associated athanogene 3
        Distance: -1401; Region: intergenic
      • AT5G07225.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 274; Region: intergenic
    Flanking Genome Sequence: 11-0079-1 - 3-prime edge 
    NTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCNT 
    NNGATTCTCA TCCACNAATA TCATCANTAT ATATACTAAA TTTNAACAAA 
    TTGATCTGAA AACTAATCGT TAGGATACCT ATNTTTGTTA ACAGATCCCG 
    CCGTCGTTTG AATAATCCAG ATAAAATACC AAACGATAAC TATTTTTTTC 
    ATTATTTTAG CNTTTCTTTC CTTTTTTACA TATTCGTTTG ATTAAATTTG 
    AAAAACGTTT GAAAGTTTCA ATAAAATCGA GTAACTTAAT TTCAATATTT 
    TGCTGATTCT TCTGTTGATC AAAGCTAATG TTATACAATC ACTTCTCTTT 
    GGCAAACGCA GCAAAGCTGA AAAATAGTAA GGGGGATAAA AGGGGATAGC 
    GTTAGTATCA CTAAAATTTA TATAGCATCT AAAGAATAAC ATTTCACAAA 
    ATTACTGATG ATATATTGAT ATGGTATAGC TTTGGGTAGT ACTAAGACAA 
    CTGATATTTT ACCAAACAAT ATATTGTTCA ATCATACGTC TTNATATCAA 
    AATT

AT5G07220.1

Model type
Protein coding
Short Description
BCL-2-associated athanogene 3
Curator Summary
A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.
Computational Description
BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07225.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G52140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR