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11-0081-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5921094 [Map]; Strand: w
      • AT1G17285.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0081-1 - 5-prime edge 
    GGGAAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGGATGNN 
    GCCATCCNAC TTTGNTCCCT GGNTATACNG NANCAGNAAN ATANGNACNC 
    GAGNCCNGNN NCCAGCNCGT NCTTCTAGCT AGGANGTGAC NGANCNNNNN 
    ANANNGGTGC GATNGANGTA NAACAGGGNN CGCTTTTAGT ATCAGGGGNA 
    ATCCANCGGT AGATGTTAAA GCAAGTAGGA AACAACAGCA GATCACAACA 
    TCAAGAAAAC CTTAAAATTC CAGTTCTTTT TTTGTCCTTA TTTANATCCT 
    CTACTTTCGT TTTTTTTGTA AAATAGGTAC CTAGACATGT GNGCTTTTAA 
    TGCTGAAATC TACTTGAAAT ATATNAACTC ATNTTTTAAT CTTATNGATC 
    GATNAANATA GGATGAAANT TTTAAAACGC CTCCTAGCTC GAGTAGGCTA 
    ACTTTCCAAA ACTATTNTNA ACCTNTTTAA TNTTTGGAGT TCTTCTTACT 
    TTTCTCNGGT TNGGGGTTTC TTTTATTNGA CTTCANGNNG ACTTATCCTC 
    AAGCCATAGN ATGTNGGTCT NAGGGGNGCT TAAAACCCTT ANAATNTAAA 
    ATGAGNNAAC CTTNTTTATT TTANAGGTNN NGGGNTNTTA NANGCTNAAA 
    AAANGNNATC CGNCANATGC CGGNANAAAA ATNGANANNN NGTTCTGNGG 
    GAAAACTNCA AAATTNNCNG NANNATTGAG GTGGNNTANN TAAATNTNNA 
    GGNGANTNNN NNNNCCCANG GAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5921101 [Map]; Strand: w
      • AT1G17285.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0081-1 - 3-prime edge 
    NTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAC 
    ATAGGGTTTG AGCCACTCCT TGGGATTCTT CTGAAGCTAT CATTTTCTCC 
    CTTAAGTGGC TCTTTCTTCA TCTCCTTGCT TACAGGCAAA TCTCTCACAG 
    CTTGACTCGA ATGTGTCATC GTTAACAGAG AACGTCCTTC TACACTATAC 
    TTTGCTGCTA AAGAAAGCTA CAAGTAACAG AACCAGAGCC ACTGAACAGC 
    ATCTCTTCAT TCTGAGTTCT CTTCTTGAAA TTTCCTTTAG GACTCTTGAA 
    ACCTCTTGAC TTTTTCTTGT TCTGTTTTTC TGTGAACTGA GAAAATCTTG 
    GATGGAGATG TGTGTTAGAG AAAAGAGAGA CGAGAGACTT CTAAAGCT

AT1G17285.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR