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11-0118-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28131028 [Map]; Strand: w
      • AT1G74880.1 - [+] show detail - NAD(P)H:plastoquinone dehydrogenase complex subunit O
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0118-1 - 3-prime edge 
    ATTGCGGTCT TATCCCGAAA CTCCAAGAAC ACAGAAAAAA AAAATTCTTG 
    GNGGCCTCTC CAATGGCTTT CTCAGCTACC CTGTCTCAGC TTTCTTCTCT 
    TTCGTCCATC TCCTCTTCAT TACCAATTTC TTCTANAANA CTTCCTCATC 
    GATCTCTTCC TCAATTCACA GTCAAAGCAN AANCAGAGAA AGANAAACAG 
    AGCGCNCAGG CTAAGTCTGA TGGGGAAGCA TCACCAGCTG CAACCAAAAC 
    CCCTAAAACT CTTCCCAANA AACCGGTTTA CTCNAGTCTG TTTACTCACT 
    TCTGTTTCTA AGNGTTGAAT CCAATTACAG ATTTTTTATA ATTCTTTTGA 
    ATTTCTGTTN GGGGGGGATG ANAAAACAGN GAAAAAGGGC CAAATAGTTC 
    GNGTANAAAA ANANAAGTNC CTCAACAGCN TCAATGTNTA GTCNAAATCT 
    TTCCTAGTTT TGAAGCTGCT TCTTTGAAAT CTGAAACTTT TTTCTTTGTT 
    TGTTGANATC ACAGTACTTA TCAGTNGGAC ATCCTCCTTT NTACAAAGGA 
    CTTGATTACN TNTACGAAAA TCGNGGCGAG GTATAACACA ATCCCTTTTG 
    AAAATAAATC ACAAGANATT TCAAGCT

AT1G74880.1

Model type
Protein coding
Short Description
NAD(P)H:plastoquinone dehydrogenase complex subunit O
Curator Summary
Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.
Computational Description
NAD(P)H:plastoquinone dehydrogenase complex subunit O (NDH-O); FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor; INVOLVED IN: NADH dehydrogenase complex (plastoquinone) assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)H-quinone oxidoreductase subunit O (InterPro:IPR020905); Has 87 Blast hits to 87 proteins in 27 species: Archae - 0; Bacteria - 33; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR