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Mutant Lines
11-0121-1

11-0121-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18070620 [Map]; Strand: w
- AT4G38670.3 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)

GCAATACCTT GGGTCTCCGA ATGCCTCGCA CGCGCTACGG CAAGCAACAC 
CGTTCCCATT CCCACGCGTC ACCAGCTTTA GGTCTCTGGG ACACGCGCCG 
TTCAAGTCCA CGAGACACCC GGTGGCTCCG CATCCTCCAA TGACGATTTT 
CTTGGGCAAG ATTAGCATCG GGAGATTGTA ACCGTCGACG AGGCTAACGT 
CGTAAAAATC TAGTCCTCCT GTGCCATTGA GAGTAAACTC GGCGAGAGTT 
GCTGGAGGTT TAGCTCCGGA GCCTGAACAT TCGACTTTTC CCGAGCCGCA 
ATCTCCGGTT AAGCAGACGA AAGAACCTGA ACTCCGATCT TGTGAACACA 
AGGTTCGTGC CCAGAGACGA CCGGACCACG ACTCTGGTAT TGCGACGGTT 
TTAGATTTTC CTCTAGAGAG ACGAAAGCCA GTTGTGGGGA GCGGCGCAGA 
GTTAGCACCA GAGAGCAAAC CGGGCCATAT CGTGTTCCGG CAACGATTCG 
TGATCTTGAA CGAAATTGGC TCAACTGCTG CCATGTGAAA CCAATTCAAT 
CAAAATCGTG TAAAGATTGT TAAACTCGAT AGTCAAGCAA TAAAGAAGCA 
AGGAATTAGA CAGCGATTAT TGACCTGAAA GAGATGAGAC AAAAGCCAGG 
ATCATAAACA AGAGGATC

3 prime edge [+] show sequence

Chromosome: 4; Position: 18070504 [Map]; Strand: w
- AT4G38670.3 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)

GGTATTGCTG CAGCGATGCG TACGCCACGC CGGACACGTG TCAGCCTTCG 
GTTTACTCGC TCTTCTTTAA GCATGCGTGC CCACGAGCAT ACAGCTACGC 
CTATGACGAT AAGACGAGCA CTTACACTTG CGCCACCGGA GCCGATTACN 
TTCATCATCT TCTGTCCGCC ACCGTATACA AGGTGAGATA TTGACCGTTT 
TGCCCCTCTG TTCGCTTTGG AATATGCTAG GGATGTTTCT TGTTATTTAG 
TATATGAGCA GGAATCTAAT CTGAGCCACA CTGTTGATTA TATGGAATTT 
AGCTAACTTA GTTACTCGTT ATGATTTGTA GTCTTTTAGA TCATATGATC 
ATCTTCTATA AGCATTTGAT TAAGATTGTA GTGTCTACTA GAAGCATTTG 
GTATGATTAT AAATGATTGT AAAGGTCTAC TATAAGCATT TGGTATGAGA 
AAGTAGTGTT GATTAAAAGG GTTTTGTTTT AATGGTTGGA AAAGCGGGTA 
GCAACAGTTG GATTGAGTTC GACAAATATA GATTGAAGTG CTCCATTGTT 
ATAAATGTAC TTAGGTGTAA TGAGCTTAGT AAGTTGTTGA CTATGAGTTT 
TGTTTTGCAG CGAGAAGCT

AT4G38670.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1594 Blast hits to 1578 proteins in 180 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 72; Plants - 1416; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38670.2

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1592 Blast hits to 1576 proteins in 180 species: Archae - 0; Bacteria - 39; Metazoa - 55; Fungi - 72; Plants - 1413; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38670.3

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR