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11-0130-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246448 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 389; Region: intergenic
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 280; Region: intergenic
    Flanking Genome Sequence: 11-0130-1 - 3-prime edge
    ATGATCAATG ATCTCGTTAG AGACACCAAT TCTCTTGTGC TATTGAACAG 
    AACACTCTGT TTTTCAGTTG GAGTATCTAA ATTACAAGTA AAACCCCAAC
    TTTTATTGTG CTTTACATTT TAGCCCCAAA GTTCGGTTAC NGTTAATATT
    GGACATCAAC CAAACCGAAT GCAACCTGGA CCAAAATTGG AGTACTCATC
    GGATTTGGAG TATCTAAATT ACAAGTAAAA CCCCAACTTT TATTGTGCTT
    TACATTTTAG CCCCAAAGTT CGGTTACGTT AATATTGGAC ATCAACCAAA
    CCGAATGCAA CCTTGACCAA AATTGGAGTA CTCATCGGAT TCGCTCACTT
    CCGATCGCTT CATTATGATT TTTTATTGAT AACTTAGATC CAAATTTTGT
    AGATTTGATT TTGTTCAAAA GCAAATTGCA AAGAGCGACA AATAAGAACA
    CAAAGAAACA CATCTCCATT TAACTAATTA ACAAAAGAAC ACACAAGATT
    CGTTCGTTTG TCAGATGGAT AGGAATTACA TTATTACATA ACTGGAAAAA
    ACATAAACTA TAATAAGTAC TTCTTAACCA AACGTCAAAA CACAATTAAA
    AGACACAGAT TTTCATCAGA CTGCCATGGN AAATCCAACA CCAGCCTTGT
    GCTCTCCACA GTGTGTGGNC ATGACCATGA NCATGAGCTT NGCCTGTAAC
    ATANTCTTG

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR