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11-0143-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 95609 [Map]; Strand: w
      • AT5G01230.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G01230.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0143-1 - 3-prime edge 
    GTCTTCTTCA CTTGGCTCTA CCTTGAATTT CTACTTTGGT GCTACTCTTC 
    TTCACATACC TAGCTGCTGT ATACTATACG GTAATTTGGC GGGTCTTCTT 
    CTTGTATATC GATTTAATCT CGAAATTTTC TACCTTGCAG ATATTTTTGT 
    TGTGCACCTT AATGTGTTTG ATAGAATGCC TCTGAGACAC ACTAGTGGCT 
    TAACTTATCT CTGTCCCTTC AGTTTTCGCT GACTTTTAGT GTTCATCGCA 
    GTGAACCAAC TCCGTATTCT ACTTTAGAGG CCATGGGAAA AGCT

AT5G01230.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 5711 Blast hits to 5669 proteins in 1418 species: Archae - 154; Bacteria - 2315; Metazoa - 596; Fungi - 413; Plants - 124; Viruses - 65; Other Eukaryotes - 2044 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01230.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR