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11-0144-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17046722 [Map]; Strand: c
      • AT4G36030.1 - [+] show detail - armadillo repeat only 3
        Distance: 0; Region: exon1 (CDS)
      • AT4G36032.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-0144-1 - 5-prime edge 
    CGTAAAATGA TTNCTCAACT AGAAAACTCC GTCGGCGACG NCTCTTGGCT 
    CCTCCGTGTC TCAACTCCAN CCGGNNACGA TGACGACGAA GGGTTTGGTT 
    ACTTAGGTCT CCCGCCAATC GCAGCCAACG AACCAATCTT GTGCTTAATT 
    TGGGAACAAA TCGCGGTTCT GATGACCGGT TCGCCGGAAG ATAAATCAGA 
    CGCCGCCGCG TCGTTGGCTT CTTTAGCAAG AGATAACGAT AGATACGTGA 
    AACTGATAGT TGAAGAAGGC GGAGTCAACC CTTTGTTGAA ACTTGTAAAA 
    GAAGGTAAAA TCGACGGTCA AGAAAACGCA GCGAGAACAA TCGGGTTACT 
    GGGTCGTGAC CCGGAAAGTG TTGAGCATAT GATTCAGCTT GGTGTTTGTT 
    CAGTGCTTTC AAGTATTCTT AAAGAAGGTT CGATGAAGGT TCAAGCCGTT 
    GTGGCTTGGG CTGTTTCAGA GCTTGTTTCT GGTAATCACG CCAAATGTCA 
    AGAACTGTTT GCGCAAACAA CGNGATTAGG CTTCTTGTGA GTCATTTNAC 
    GTTTGAAACG GTTCAAGAAC ATNNCANATA CNCGGNTGTT GCGGGTNGNA 
    GCAACGTTGA TGCATCACGN CCGTNNGTAA TGGCTAGTTA AANTCNATNN 
    NTGAAANGAA AATTTACCNG GNNTTGAACG ANGAAGGANG ATNACCANTN 
    ATCCTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17046838 [Map]; Strand: c
      • AT4G36030.1 - [+] show detail - armadillo repeat only 3
        Distance: 0; Region: exon1 (CDS)
      • AT4G36032.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-0144-1 - 3-prime edge 
    ATTTTACGGA ATGCTGCGGC GGGGATTATG TTGAAAAGTC GCATTATGTA 
    GCCATCGTCA CGGCATCTTT GGACCATCGT CAATGCTTTT TCAAGAACCG 
    TTTTCAGTGT CGTCGAGGAT ACGGCGCGTG GGACNGTTCG TAGAGGTCNG 
    GAGCNTTGCA CNGGGCCGCT TGACGGAGAA GAGCAGCGAG CTTTTCCGTT 
    TTGGACTTGA TATCGGCACA TTCTTGTTTG TTGATTGTGG CTTCATCTCC 
    GGCTTTCACC ACTTGGTCTG CAAGTTGAAT CGGGCGAGAC AATATCTGCT 
    TGGCTAGATC ACCCATGGAT AACGAAACTG GTTACGATCA AGAAAATCAA 
    AAACGGGTTG ATCTTAATTT TAAAGAAAAT GAAGAAACAT TTTGTTGGGG 
    TTTGGTTTGG TTTGGTCTTT GAAACACGGT TTCTGTCATT TCTAATGTAT 
    TTCTTACAGA ACACGCCGGT CGTCGCCGGC TTTCGTTGTC GGAGTAAATT 
    ACTTATTAGT ACATTTACCA AGTCGTCTTA GCCCTTATCG TTCTTTTTTT 
    AATATTAAGC ATATTCCATA TTTTAAACTT TAAAGTATGC TAGCTAGGAA 
    TATAGGATTT CAGAAGTTTA TCAAGAAAAA TGCTCAAAAG CGATTACAAA 
    AATGGTTCAA ATCTTCAATA TTACGTTTAT TGATTCCCAA CTGTGTTTTG 
    GGATTCTCAT GGGTTAAATC CCGAATT

AT4G36030.1

Model type
Protein coding
Short Description
armadillo repeat only 3
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 3 (ARO3); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 616 Blast hits to 538 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 129; Plants - 303; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36032.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G36030
Link
InterPro Scan - TAIR