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11-0151-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20162999 [Map]; Strand: w
      • AT1G54020.2 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G54020.3 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: 0; Region: intron1 (5UTR)
      • AT1G54020.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 11-0151-1 - 3-prime edge 
    TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCGTACT 
    CTATACTAAA TGGAAATTTT GATTGGTAAT TAAAGATATA TGAAATTGAT 
    GAGGGGTGAA TAAATCACAG CAAAATTCAT GGGGATACCA CACGATTTAC 
    CGCCGGCGCT AAAACCCGGC ACCGATGTGT CACNGAGGAG CCAGCTTCGC 
    CGTCGGGTCC GCTTCCATTC TTGGATCTCC AAAAGATTCT GTAAGCTCAC 
    TTAAAATATT TGTTAATCAA TCGTAAAGCA ATGTCATAAT AAAGATTCAC 
    ATTTTTTTGG TAGTTGGCTC TGAATCAACA AGTGAGGAAA TTCAATCAGA 
    TGATATCAAA TTGGAAAGTG GATTACATTC AGAAATCAGT GTTTATGATT 
    AGCATTGGTA TGGAAGATTA CTACAACTTT ACCAAAAACA ATCCTAATGC 
    TGAAGTTTCT GCTCAACAAG CT

AT1G54020.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G54020.2

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 3048 Blast hits to 3018 proteins in 88 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 2; Plants - 2967; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G54020.3

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR