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11-0168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 595830 [Map]; Strand: c
      • AT2G02250.1 - [+] show detail - phloem protein 2-B2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0168-1 - 5-prime edge
    GNCATNTCCT ATTTCTTAAC AACATAGGCC GACTTTAGAA NANTNCTTTA 
    AATTCTGAGT TTCCAGATGA AGAAAGATAA TACAAGCAAC AATGGGACAC
    AAACAAAGCG TTGACTCTAG AGGCAAAGGC CGAAAAAATC CCGGTTCTTC
    GTCGATGGTG CAAAAACATA GCGGAGGAGC GATCATCTCC GGACCGTCAC
    TGTTTGATAA CTTACCGGAG GATTGCATCT CCAACATCAT CTCTTTCACG
    AGTCCTCGTG ACGCTTGCGT TGCAGCTTCC GTTTCGAAAA CCTTTGAATC
    GGCTGTTAAT TCCGATAGCG TGTGGGACAA GTTTCTTCCA TCGGATTATT
    CGTCTCTAGT TCCTCCATCT CGAGTTTTCT CATCGAAGAA GGAGCTCTAT
    TTCGCTATAT GCGACAAGTC CTGNTCTAGT CGAAGATGGC GGGAAAGGTA
    TATATATNAC ATCGNGGNTN TGATTGATAC NANGGGAACA ATCNNNGGNN
    GTAGNTNGNC AGNGTANNTC CANTTCCATG GCNNNCNNTT GCAGANATGG
    ATNANGGGAT NNGAANAGGG NNNATTNTNA NGANNNANAT ACNNGTGGTT
    GTCGNGAAAA TNTCGAANCT TCCTGGGGTN GAAGAAAATA AAAANGGGGA
    AAANAGNNGT NTNATGTGNA TACNCCNGAA AAAANNNCGT GCNGNCTNAA
    CATTGGGTNN NGNNTTCCCT NGAGNATANG NAGNAGGGNN NNNNNNT

AT2G02250.1

Model type
Protein coding
Short Description
phloem protein 2-B2
Computational Description
phloem protein 2-B2 (PP2-B2); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR