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11-0170-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4163172 [Map]; Strand: c
      • AT3G13010.1 - [+] show detail - hAT transposon superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0170-1 - 5-prime edge 
    CTCTCCAGGT GAGTGAACTT TCTTGATTTT TTATATATAT ATAGTAATAT 
    TGTTTTATTT GCAGACATTT AAGTTTTTGA ATCTCTTTGC AGTTAATTGG 
    TGGACTCAAA AGGCGAACCA GTATCCTGAA CTGCAGAATC TCGCTGTTAA 
    GATTCTGAGC CAAACAAGTG AAGGTGCTTC AAGGTACAAG CTGAAGAGAA 
    GCGTAGCAGA GAAGCTGTTG CTCACTGAAG GAATGAGCCA CTGTGAACGA 
    AAGCATCTGG AAGAGTTGGC TGTTGTACAT TACAATCTCC AACTACAAAG 
    CTGCAAAGCC TAAGGAAGTG AAGAGCAGTG AAGATTTGTT TTGCATATGT 
    GACTCCATTG ATCACAAGCT

AT3G13010.1

Model type
Protein coding
Short Description
hAT transposon superfamily protein
Computational Description
hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13020.1); Has 542 Blast hits to 530 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 539; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR