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11-0173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8551602 [Map]; Strand: w
      • AT2G19810.1 - [+] show detail - CCCH-type zinc finger family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-0173-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCANCA NCCCGGGCCG NGGACNANAC GTGNCCTATA TGCAAGTTTT 
    TTTTTGTATA TTTATTATTT CCTAATTTCG TATAATCTCT GTTCCATAAT 
    CGATGATTCG AGGGAGATTC CTNAGTGTAT AGGAGTTGCT TAGGATTTTT 
    CATTATGATG GATTCACTAA TATTGATATT GTNGGTTATN GTTTTTTTAT 
    ATATTATGAT GTAAGATGCA NGTCGNANTG TAATTATTAA ATATCTTATG 
    AATGAAATGA NAANGTAAAT TATTTATTNN GNTATGAGCA TTTANGTAAT 
    GTGCTAATCT NNAANAATGA TTTGTTTTGG TNTGTATATT GAGGNATGCA 
    NTAANGNGGG GGTAGATGNA ATNANCGGAN GAAAACTTNT TTANNNGNAA 
    ACTTNNNANT NTGTNANACN NNTAANNANG GATGNNCNAG NGAANAGAGA 
    TNANNGNAGA GANCTTTNAN NTNTCNTCTA GAAAGNAANN AANAAATANN 
    TNNNGAAANT NNNGNACNCG GANATAAAAG ATNGGGNTAN ATNAGGTNAA 
    NNANANNNNG AGTTNGNNNN GAGNNCNANA GNGTNNNGCN NGGNNNNTNN 
    AGNNNTGNNC ATTGANATGA GATGGGNNNA GTNNNGNGNG GNGNGAGNAN 
    NGNNGAGCAN AGAGNNGAAA NNANNTNNAA NANAGGAGTG ANNNNATAAT 
    NTNTGNTTNA GCNGNTANTC NNAGNTGGTA NNANNNTANN TGNTNTNAAT 
    ANGGNNNNGN GNNANATGNA TANAAATANG NTCNCAGNNN GGTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8551556 [Map]; Strand: w
      • AT2G19810.1 - [+] show detail - CCCH-type zinc finger family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-0173-1 - 3-prime edge 
    TCTTTTCCTA AGAAGAGATC CATTAAAAAA CCTCCCATGC CGATAATAAT 
    CCTTTAATTA ATCTTTATCA ACGAAATTTC AGACACTCCG GTTTACGAAT 
    CCGGTTCAAA TCACATAACC AAGTCAGAGA CCCACCCGAC ATCAGGAGTA 
    TCACCCGCTC CCTGATCCGG ATC

AT2G19810.1

Model type
Protein coding
Short Description
CCCH-type zinc finger family protein
Computational Description
CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink).
Link
InterPro Scan - TAIR