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11-0210-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 579365 [Map]; Strand: w
      • AT4G01410.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: 196; Region: intergenic
      • AT4G01420.1 - [+] show detail - calcineurin B-like protein 5
        Distance: 673; Region: intergenic
    Flanking Genome Sequence: 11-0210-1 - 3-prime edge 
    GTAATATTCT AAGTATTTAA TTATAATCGT GAGGAAATAG TTCCGTAATA 
    ATGGGGGAAA AATATATATA TGATAAAACC AAAATGAGAT TTGCATGAAG 
    ATGCCATATG TCTGATCAAA CACTCTGAGC NTGTTGTGTC GATGAACTCA 
    CCATATGCCA AGATACGCTA TTAGCGACAA CACATTTGTA TTGTCAAATG 
    TCATTAATTA ACATCCACAG GTCCAACAAC AGAGAAACAA AATAATTATC 
    ACAAGTAAAA TATAAAATTA GTAATATACC TTGTACTTCT AATTTTTGGC 
    TTATGCCTTT TAATTTATTT TAACACTAGA CTCGACGAAA CTCATCACTA 
    ACATGACCAC AAAAAAAAAA NATTNCANTT NTAAACCCCA AGGATTAAAA 
    ANNAAACCTT ACCGANGTAA ANTTAAAACT ANACNTCANC TTTNCAANTT 
    GAAGGACCNA AAAAAGGAAC TNGNCCGTTA GAAAATGGNT TAAATTTCAA 
    CCACNCATCA NNTNTGGNGT AAAATCCNTA CCGNCCANTN TTANTCGCNC 
    CAGNTTNCCA ACGTTNNCCT CCCAAAAATC NCCCCTCTNA TCAAAACNAN 
    CNCCGTANGC TTCCAGNCCG GGGCCGTGNN ACCANCGTGC CCCNNTNTAA 
    NNNGNGA

AT4G01410.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 1 (TAIR:AT3G11660.1); Has 938 Blast hits to 938 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 938; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01420.1

Model type
Protein coding
Short Description
calcineurin B-like protein 5
Curator Summary
Encodes calcineurin B-like protein 5 (CBL5). Overexpression confers tolerance to drought and salt stress.
Computational Description
calcineurin B-like protein 5 (CBL5); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to salt stress, response to water deprivation, N-terminal protein myristoylation, calcium-mediated signaling, response to osmotic stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, flower, leaf; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G24270.2); Has 5545 Blast hits to 5527 proteins in 657 species: Archae - 0; Bacteria - 7; Metazoa - 2787; Fungi - 925; Plants - 1302; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR