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11-0240-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1144672 [Map]; Strand: w
      • AT1G04280.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 11-0240-1 - 5-prime edge
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGG AGCATATCAT CGTGGTGACC TCTAGAGCTA
    AGAGCTCTAT AAATTACATC CGTCTCCTTA AACGCGTCTG CCTCTATAAC
    CACCGCGTCG GCCTGTGCCT CCGACCAAAA CGACCTACAA AATATTATTT
    CTGGTTATTT AAAGAAAGAT TAAGTAGGCT TATAACCACC ATATGTTAAA
    GAAATACAAG AAAAAAGAGT TATACTCTAG GAAGATATCT TTGAGGACGG
    TGCTCTTTCC TGCGCCCATT CCTCCGCCCA TAAGGAGAAG GACGGGACTT
    CGTTTGTTAT GAGCCACCGG AGACATTACT TCCGTACAGT GTGGCTCACT
    GCTTCCGCTC CCAATGACTC TCATCTCTTC TACTAATGTC GAAATTACCC
    TTTTCACCTT GAGATCTTTT GTTACTCTCT CAAACCTCTG TTTCCTACAT
    TATTAACAAA GCCATTAATT AGTTCTACAA TGTTTGTTAA TAGTTATAGA
    TTAATAGTCA GTTCTACATT ATATGTTACG CTTGGTACAG TTAGTTGGAA
    TCATTACGCA ACGACGATTA CGGGTAACGC AATTTATATG TATGTAACTA
    TAGGTATGCA TATATAAAGT CATGGATATG GAACAATCAA TCACCTTGTT
    GCTGCCATCA CGAAATCCTT GAGTTTTGGA ACTTTCTGAT CCGACTCATC
    GCTTA

AT1G04280.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.2); Has 195 Blast hits to 194 proteins in 47 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR