1. Home
  2. Mutant Lines
  3. 11-0252-1

11-0252-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14914080 [Map]; Strand: c
      • AT5G37540.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0252-1 - 5-prime edge 
    CGGGCTATTG GTCACATCAA ACTCAACCCA AAGATTTTGC TGATGAACGT 
    TCCCGATTAT ATTACTAGCT GCACCAAGCA TGCTTGACCG TCCGATTCCA 
    ACACAGTGAA TCCCACCTCC TACGTTAACC AAAAGGCTTT GTTTCTCAAC 
    GAGTATCTCA ACACCTCTCC CAAACTCAAA CACAAGATCG CCTATCAACC 
    GTCCGATCTC CATCGAATGG TTACCATCAA AACACATGTC AGCTGTCGAA 
    CCGTACACGT AACCTTTCTT TAATCTTGAT CCCACAAGCC TCACTATTTC 
    TTCTTTGACT TTATCATATG CCACGTCGAC TAAGTGAGTA AATTCAGAAC 
    CCGAATCAAC CATGGTTTGA CCCGACCCAC CTGCATCGGG TCTAAAAACA 
    GAACCGGGTA TGTTGAGTCT CTTTTGTCCG ATTCTGATAC CTTGTAATGG 
    TACAGTGTAA GCTAAAGGGT CTAGATTCGG CATGCGTTGA CTTTGAGGAA 
    AAGTCAAAAG AGAAACGTAT TTGAAACCAC GAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14914148 [Map]; Strand: c
      • AT5G37540.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0252-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    AGGAGAGTTG GTTTTAGTAA AGCTGAGTGT AGATTATTGC CGTGAGTAGG 
    TGAATATTCT TCTACGGTCG TGCGTATTAG TTTTGAGTTG TATCTCATTA 
    TGATGATCGT TGGATGTTTG ATCGAATGGT GTATAGGAAA TCTGGGATTT 
    TTGTGGGTCC CGTAGAAGGA CAACNTGTCT GAAGCAAACT TCTCAATCTT 
    TATTAGGCTC TGGAACTATG TATAAATGTT TGTACTATGA TAATTAAAAG 
    CT

AT5G37540.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G66180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR