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11-0254-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 372240 [Map]; Strand: c
      • AT3G02110.1 - [+] show detail - serine carboxypeptidase-like 25
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0254-1 - 3-prime edge
    GTTTGTTGTA ATTCATGATC TCTTTGGCCA GCTGAGGAAC GTAATGTCCG 
    GCGTAACTCT CGCCGGTGAT GTAGATTTCC CGGTGGTTGT ATCTCGGAAA
    CCGGTGAAGC CATTGAATAA GAAACTGAAG TGAATCTTTG GCTGCAATAT
    ACAGAGAAAC AGAGCCTCAA GAACCGAAAC TCGGTTAAGA TAAACCGTAG
    ATGGAGTTGG TTTAATTTAA AATTACCGGT ACGGCGATCA CCGGTGTTGA
    AGAGATCGGA GGAGCGGTTA GTGTAAGAGA AGCCGACGCC GGCGGGAGCT
    TCGAGGAACA AGAGATTGGA GATTGAGTTC CATGCGAACT TGTTGAGATA
    CAAACCGGAA CCACCTTTGC TTATCCTGAA TGGTCCAATC TCCTCCGACG
    CACCGTACGC TACCGACGAA CATCCCGGTC CTAATAATTA AATGTAAATC
    TCAATTAGAG TTCATTAATT ATTTTTTACG ATTAACACGA ATAATTAGAA
    ACTACTAAAG AGATAGACTG ATAGAGTTTG ATAGGGGGGT TGAGTAATTT
    ACCCCCAAAA ATTAAAAATT GATAGAGGTT GAATTTAAGT GTGAACAAAA
    AGAGACCAAA AGTTAGTTGT GTATTAATAG CGTCTCAATG TCAGTTTGGA
    AATTGCATTT AATGATATAA CTTTTTTCCA GCAATTTACA ACATAATTTT
    GTCTATATTA TACGTATCTA ACAAGAAAAT ACAGCGATCT ATTGAATG

AT3G02110.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 25
Computational Description
serine carboxypeptidase-like 25 (scpl25); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3637 Blast hits to 3574 proteins in 364 species: Archae - 0; Bacteria - 191; Metazoa - 636; Fungi - 868; Plants - 1530; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).
Link
InterPro Scan - TAIR