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11-0268-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1887612 [Map]; Strand: c
      • AT4G03960.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0268-1 - 3-prime edge 
    CTTTTGGATA CCTTTTAATA TTCCCCAAAA CTTCTGAATC TTCTTCTCAA 
    TTTTTCTCGA CATTTTTTCA TCGAAAGCTC TCTTCCTTTC CCTTTTTGGC 
    GCTCAATACA ATCATGACGT TAGAGAGTTA CGCCGGCGAT GTTCACACNG 
    GTACCACAAT CGGAGAACTC GATGGAGGAG AGAGGCGGCG GTGAGCNTTT 
    TCGTGCCACC TCTTAACTTC GCTATGGTCG ATAATGGAAT TTTCCGTTCT 
    GGTTTTCCTG AACCCGTCAG TTTCAGCTTT CTCCAGTCTT TGCGTCTCAA 
    ATCCATCATG TAATTTCTCT TAATTTCATT CTCTTTGTCC TTAATTAGGT 
    CAGCTTCGTC GTCTTAATCG CAAATAGTCG CTGATTTAGT TGATATGGAG 
    ATATAATTAT AGCTAGGGTT TTATAGAATG TTTCTGTTAT TAAGAAATGT 
    GAAATGGTCA AAAGAATTAG TCTCTAATCT ATTGATTATT GTTTTGAATG 
    TGTATTGTGA TCTATAGATA TTTGTGTCCT GAGGCATATC CAGAGGTGAA 
    TAGAGAGTTT GCAAAATCAA ATGGGATC

AT4G03960.1

Model type
Protein coding
Short Description
Phosphotyrosine protein phosphatases superfamily protein
Computational Description
Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT1G05000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR