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11-0279-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18121115 [Map]; Strand: c
      • AT4G38825.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -411; Region: promoter
    Flanking Genome Sequence: 11-0279-1 - 5-prime edge 
    CTACACATAA TTGATAATCC ATTATCCATC TGACTAACCC TCCATATTAT 
    CCGTGAGGGC ACTGTCCTGC AAGTGTTGAG AAGAGAGAAA TAGAAAAGAC 
    AGAGGGCCCG CCGTTTTTTC ACGCTTAAAA CAACACGTCG TTCTTCTCTC 
    TGGACCTTAA CTGTGTGGCG CTTTATGGGA TTAGCGATCC CGTTACTAGT 
    TGCAACCAAC TAAATAACAC GATGTTTCTC TCTTTCGCAG AAAAACTGCA 
    TGGCGTTCAA GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18121231 [Map]; Strand: c
      • AT4G38825.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -295; Region: promoter
    Flanking Genome Sequence: 11-0279-1 - 3-prime edge 
    ATGTGTAGCC ACTTGGCTAC TTGACTCAGT GACTTAGACT TTTCAGGTGC 
    TGTGTAGGTA TATAACATAA AGGTCCCACG TACATCATCT ACATACCATT 
    CCAAAGAGAT GTATATGTGC CATCGACAAT TTCATGTGAA GTGCGCTCGA 
    AGTTGTTGTT AGTCTTCTAG TGTCATGAAT T

AT4G38825.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR