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Mutant Lines
11-0304-1

11-0304-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 30307684 [Map]; Strand: c
- AT1G80620.1 - [+] show detail - S15/NS1, RNA-binding protein
  Distance: 267; Region: intergenic
- AT1G80630.1 - [+] show detail - RNI-like superfamily protein
  Distance: 1012; Region: intergenic

TTTACCGGGT TGAAGTAACG GTTCACTCTC TCTACTCTAA TAAACCATCG 
CTGACTTTAG AAATTTGAAT CCCAATATTA ACCGGGTTGA AGTAACGGTT 
CACCTCCCTC TACTCTAATA AACCATCGCT GACTTTCGAA ATTTGAATCC 
TAATTTGGTA AAAGGCCAAA AGTAAAGCCA TTGATAAAAG ACGACTAACG 
ATTCCGTGCA CCTCTTTCCT CCGAATCACC TCAGTTTCTG TTCCGTAGGT 
GTTCACTTTT CATGTTTAAC ATGCACCAAC CCTAAAGGTT AAAAAGGATA 
AAGTGGCAGT AAAAGATAGA TGCATTGAGA AAGATAAGTT GGAGAAGTAA 
GTTTATTATC ACATTCAAAG TAATAAAGAC AATGTCAACG AAAGTATCCC 
ACAGCTTTAT TCTCTTTTCG CCTTAACAGC CTGCAATCAT AATCTCTAGT 
AGAACAACTT TCCTCCCCAA TATGATTGAT AAGAGAGACC CACATTATCT 
CTTTTGCCAT AATGAAAAAG AACAAAAAGA GAGTACTGAG ATCACAATTC 
TATGATGTCC CTTGCACAAA AATTTCAAAA CTTGTAAT

3 prime edge [+] show sequence

Chromosome: 1; Position: 30307800 [Map]; Strand: c
- AT1G80620.1 - [+] show detail - S15/NS1, RNA-binding protein
  Distance: 383; Region: intergenic
- AT1G80630.1 - [+] show detail - RNI-like superfamily protein
  Distance: 896; Region: intergenic

CCGGTAAACA TATNACCGGG ATAAAGCAAT TGAATTTGAA ACGACACTTG 
AGAGTTTATT TATTACATCT TCTTCGACTT CCTCTCCTAA GAAGTAAGAA 
CAGTCACTCA TGGCGTTTCA TCTACTCAGA CCAAAACAAA GGTTCGACNT 
TGAACCCATT TCTGATCCGT ATTTTCTCAA CATCCTCATC AAGCCTACCC 
TCTCAATTAC CGTCGAACTT CTTTACTAAG AAACCTCTCG TCGACCGGGC 
GAGGGATTCA GGCAATGTTT TTGACCGGTT TGCTATTAAT CGATATCGGA 
GAGAGAAACC TGTAAGTTTA CTCCTTCTTA ACTCGTCAAG CATTCTACTT 
TGTCAAAGCG ATTAGTCTAA AACGAGATCT TCCATAGACT ATGTTTGCAT 
GTTTTGTTAC CATTAAGAAA TGTGGTAAAA CTGGAAAAGT CTGATACTTT 
GTGCATAGTT CTAGGATGAA ATACAAAGCG AGGTTTTAAT AACAGAGCAG 
CCANNGGAAG AAAAAAGGAG GAGACCTGGG NAGACCCAAG AAGAAACAAC 
TNGTNNGAGA AGAAACCACC ATTGGACNAA AAAGAAAAGC AGAGCTGCNA 
NGTGTTTNCA AGGAAAACCT TTGACTGNTN NTGGGGAGCT GTNTACAAAA 
ATGCACNTAT AGAAATCACT CCTGGATTNC TTATGCCGTG GTAGACGCAT 
GNCAANGGGA TGGTTNGAAT GGGNGNNCCN

AT1G80620.1

Model type: Protein coding
Short Description: S15/NS1, RNA-binding protein
Computational Description: S15/NS1, RNA-binding protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: S15/NS1, RNA-binding protein (TAIR:AT1G15810.1); Has 7972 Blast hits to 7972 proteins in 2715 species: Archae - 0; Bacteria - 5433; Metazoa - 85; Fungi - 116; Plants - 310; Viruses - 0; Other Eukaryotes - 2028 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80630.1

Model type: Protein coding
Short Description: RNI-like superfamily protein
Computational Description: RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR