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11-0314-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11587760 [Map]; Strand: c
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0314-1 - 3-prime edge 
    GCTACGGTTG CAGGACTGCG TCTCTTGATC AGCGGGAAAC AGTAGGAACC 
    AGAAGGTTCT TCCTCAACCA CAAAAACATC AGGCGGGTTG AAACCGTAAA 
    GCGCGGTTCG ACGGAAGAGA CACCCCGTCC CAACATACAT CGGACCTTGG 
    ATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11587644 [Map]; Strand: c
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0314-1 - 5-prime edge 
    ACCGTAGCTT CTGAACCAGA GTACTACACT GACGAGGAGG ATAGGTTTGA 
    TATTGGTTTG ATTCGGAAGC AATTCGGTAG CCTCGAGTAT GCTAGTGAAT 
    T

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR