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11-0317-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 374520 [Map]; Strand: w
      • AT3G02110.1 - [+] show detail - serine carboxypeptidase-like 25
        Distance: -798; Region: promoter
    Flanking Genome Sequence: 11-0317-1 - 5-prime edge
    NGNATATNNA TNCTGGGNAA AGNCTAAGGA TNCTCNCGNG CTACGGATGT 
    ATANCATCGA GANCGTACGA CTGGGACTTA TCCTTNCTTT NAAGATCCTG
    CNCACNTGTN ATANAAACCA AACNNCNTGA TCCGGAGGAC CCNGGNGANT
    GGNATTTANG GACNNGNGTN NGAGGATNAN CAGNATATCN GAGACGAGNN
    CGCATCNNGA TTCTGNNGCT GATTGCGANG AGAAGAAGAA ATCCCCNTTG
    TNGNCNGCGC ATGCTANCAC AAGNTGCCGG GCGAGANGAA GATTACCTAN
    NGAACGACTC AGAGAATATC TTGGCGGNNA ANTTCGTTAG NCCAGANNTC
    GAATACGCTG CNGGATGTNG NTATGGNNTT NACAGGTAAC TTNANGAATA
    TCTCNATNAG GAGATCACCA NCCNGGGCCG GCTACNTCGC CGGCCNTANA
    GCTNNTGCAA TGCCAANNTG ANNGNNGAAA CCNANTNGAT NCTATTATAT
    ACATATNACN TAGGAACGAN GGCNNNAACA CNANCNGGCC TAAAACTACT
    AAAGATATTT GTGCAATCAG CTGTATCAAA AGAGTCATTT TGCACTATAT
    ATTAAATAAA TTCCGGCCAG GGGATTATAT TGAATTAAAT ATCACGACTC
    CAAACATCCA AGTTAAATAT GACTTTTTAC AATCTTTTAG TGAATAAAAA
    TTACNTAAAC NTATAAATGT NTAAAACTGG NCTTTACAAA NAN

AT3G02110.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 25
Computational Description
serine carboxypeptidase-like 25 (scpl25); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3637 Blast hits to 3574 proteins in 364 species: Archae - 0; Bacteria - 191; Metazoa - 636; Fungi - 868; Plants - 1530; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).
Link
InterPro Scan - TAIR