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Mutant Lines
11-0330-1

11-0330-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 147618 [Map]; Strand: w
  - AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
    Distance: 0; Region: exon12 (CDS)
Flanking Genome Sequence: 11-0330-1 - 5-prime edge
```
TATGCAACTG GTGACAAATG GCTCCGAGAG TTGACAATCA GATGCTTCCA 
AATTTTTTCC GGCAGTTCAT TATAATTTCT GGTGGAGTTG TTGGTGGGTC 
GGATC
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 147505 [Map]; Strand: w
- AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
  Distance: 0; Region: exon11 (CDS)

GAACTTGCAT AAGCATCAAA ACAATAAAAT GGAAAGAGAC TTACATCGTC 
GTGACAGCTC TTACATAATC CATAACCAAA GCGTTTTAAA TCCTTATGTT 
TACAGTTCAC TACTCCTTTG TCAGAATTTG GTCTTGGGGT AAAAGTTTCT 
TTACGCAATA TCTCTTCGCT TTCATCAAGC TCATCAACCT AGACAAGCAT 
TGTACAACAT TTAAAAAAGA ACCAACTAGA ATCGATTTGT AACATAATCC 
TGCAAATGAA ATTACTCACA GTTAAACTTC CAGCCTCGGT ATCAGCAAAC 
TCATTCAATC TTTTGGTTAT TGTTGCTTCA CACATATGCA CAACTTTTGC 
CTGAAAGTTA TATAGAAAAA CACATCAAAT CGAAACATCT TTGCTCTCAT 
CTTATAACAA GATTCTTTAA AGAAGCT

AT2G01280.1

Model type: Protein coding
Short Description: Cyclin/Brf1-like TBP-binding protein
Computational Description: maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR