1. Home
  2. Mutant Lines
  3. 11-0333-1

11-0333-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 148830 [Map]; Strand: c
      • AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
        Distance: 0; Region: exon17 (3UTR)
    Flanking Genome Sequence: 11-0333-1 - 5-prime edge 
    ATAGGCACAC TAAACACTAA AACTATTGTT TCGCCGAAAC ATGAATCGTG 
    TTAGGTGTGA ATCCATGTTG TGACAAAACT AAAACTATCG ACCTCGCAGT 
    GAATAGTAAT AGTATGATTA ATACAATCCA AAATCATAAC CATTCTCTTC 
    CTCTTCCACT TCGTCTTCAT AGAAGTTCTC ATCTGCGTGT GGTGCTGCGT 
    AGTCTTCTTC ATCTTCAACA TCTTCTTCAT CTTCAACAAT CTCATGCTCT 
    TCCTTCTTCT TCTCCGTTAC TGTCTCGGTT CTCGGTTTCT TCTGTGTTGG 
    CTGAAAGAAG AAACAAGAAC AGAATTGTAT AGACCTGAAA AGTGATGACA 
    ACTAAGGAAA CAACAAGACA AGAGAAGAGA GGATAAGAAA CTTACGCTAG 
    TATCAAAGAG CTCGTCCAAA ATATCGGTGT TGATTAACCC TGAGTCTCTG 
    TATAAGACTC AAAATCAGAA ACCCAAGAAA ACACTTCTTC AAAAGATACA 
    ATATATATTT ACCTTCCTCT CAAGTGTTCT GCAAACTGCT TCCGTGGCTG 
    TAGCTGGTGG GAGGTGCATT CTTAGCTTCC TCGGCACGTT TTCGTCGCTT 
    TTCCTTTCTA GAATTACCAN CCNGGGCCGN NNACCCNCNG GCCCCNNNAA 
    NNNNNNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 148946 [Map]; Strand: c
      • AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
        Distance: 0; Region: exon17 (3UTR)
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-0333-1 - 3-prime edge 
    GTGCCTATGA TGATATATAA CAAGGAGCAA AGCCCAACAC AGGCCCAGTA 
    GTAAAAGAAG AGCATTCAAA CACAACAAAG GCAATGAAGA AGCAAAATGC 
    TGTTTACAAG ATTGATTGAT GATGATGACG ACGATGTCAA TGCATCCAAA 
    ACTCTGTCAA AAGAAAGTCA TTCATCCTCC TCACAGTGAC ATCATCCAAA 
    ACCTAATCTC ATATCATCTA AACCATAGAG CAAACCATAA TCCTCTGTCT 
    CCTAATACAT AAAGGCCAAA ATCAACGAGA AGAGGTGTGG TGTGTGTTTC 
    AGTGTTTGTT CTTGATCTTA ACACCAAGCT CACCTGCAAT GATAACAGTA 
    GAAGCCATAT CCAGAAACAT CCCATGCTCC ACTACTCCCG GTAGCCTCAG 
    AATCGCATCA CTCACTGCTC CCAAATCTCC CATATCCTCT TCCACATGCA 
    TATCCACTAT GTAATTCCCA TTGTCTGTCA CAAAGGCCTT CCCTTTCTCT 
    CCCAAACGAA GATTCGCTTC ACACCCGTAT CCTTCCAGCA GACTCCGGAG 
    CTTCTCCGCC GTGAATTTTC CAGCAAAAGG GCACTATCTC CACCGGAAGA 
    GCAAGCT

AT2G01280.1

Model type
Protein coding
Short Description
Cyclin/Brf1-like TBP-binding protein
Computational Description
maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01290.1

Model type
Protein coding
Short Description
ribose-5-phosphate isomerase 2
Curator Summary
Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.
Computational Description
ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR