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Mutant Lines
11-0335-1

11-0335-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1725913 [Map]; Strand: c
- AT1G05770.1 - [+] show detail - Mannose-binding lectin superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT1G05780.1 - [+] show detail - Vacuolar ATPase assembly integral membrane protein VMA21-like domain
  Distance: -695; Region: promoter

CATGTGGGCA GTTCAAAAGT ATCTGCATAG CCCAAAATCC ACATTTTAAT 
TTATATTAAC CATGTTCGTG AGATCAATAT ATATAATTAA GTACATTAAG 
TTGTTGTTAG TAAATTTCGA ATTTAGTGAT TCGTGTACTA ATGAAGAAAA 
ACAAAAACAG AACACACTCA CAACGTCAAA CATCCTGCCA GTATTCTGAC 
CGTGGCAGGA GGATAAGAAG AATGTATCGT CGAGCATGAA CTGGAACTGG 
ATAGAGAAAA CACCGGTGGG ACCATGAGAT AGAAATATTT GAGAGATGAT 
TCCATTGTGA CTTCCTTCAT CCCAATCGAC CATTGTTTTC TTACCTGAAA 
AATCCGTTCC CACTGGTCCT ATCTTGATTT TCCCTTCCAT TTTCTTCTTT 
ATGTGTTTNT TTTGTTCCCT CTTACTTTAA GGATANTGCA NGAGTTAATT 
TCTTATAAGN CGGTGTTTTT AGGATAATCT TGTTACATGA NGANATATTC 
CTTGCNTAAC CTTGGNAANC AATNATATAT TCNNCACNCG TTAGTCCATG 
TCCTANCTAT GNAATANGGN CANTANNCGG AACCATATNA NACGATNAAA 
CCNCCANGAC TCATTGGCAN TNCAAAAAAA ACCGNNAACN TTNNCCNNAA 
NCCNGNNNAA NTNNCNTTCA GNAAACNANT ACCGNTNAAG ANNTATNGTT 
TGGTCCCGNC CCNCTNANTN GGCCTNA

AT1G05770.1

Model type: Protein coding
Short Description: Mannose-binding lectin superfamily protein
Computational Description: Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G05760.1); Has 502 Blast hits to 381 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 502; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05780.1

Model type: Protein coding
Short Description: Vacuolar ATPase assembly integral membrane protein VMA21-like domain
Computational Description: Vacuolar ATPase assembly integral membrane protein VMA21-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (InterPro:IPR019013); BEST Arabidopsis thaliana protein match is: Vacuolar ATPase assembly integral membrane protein VMA21-like domain (TAIR:AT2G31710.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR