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11-0338-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16041705 [Map]; Strand: w
      • AT5G40080.1 - [+] show detail - Mitochondrial ribosomal protein L27
        Distance: -82; Region: promoter
    Flanking Genome Sequence: 11-0338-1 - 5-prime edge 
    GTTTTTGTTC AAGGTTGAAG ATAGAGTGTA AATGATGTCG TATTGGGTAA 
    AATTTGGAAA ATTGCTGTTT TCAGAAAACT ATCTGACTCT AAACAAAAGA 
    AATTGAAAAT ATAGGGATCA TATTTACAAA TTAGTTAGCT TAGATTTACG 
    CACGTATTAT ATGTTTGTTG TAGGTGTTTA TTTTCGAAGT ATAGCATGAC 
    GCATAATGTC TTCTTGTATC AAGCTGTTTT ACTATGTGAA CATCCAATTT 
    ATCAAGTGAA TATATATTCC ACGGCATTAA CATGTTATCA ATTATTTTGT 
    ATATCGTTTC GTGAAAATAT CAAACCAAAT CTACCATTTT TAGAATAGCA 
    CAAAGAGGAT TAAGGATAAT AGAAGAACAG AGTCCTAACT TAAAGCTTAC 
    TGAGGGAGCT

AT5G40080.1

Model type
Protein coding
Short Description
Mitochondrial ribosomal protein L27
Computational Description
Mitochondrial ribosomal protein L27; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27/L41, mitochondrial (InterPro:IPR019189); BEST Arabidopsis thaliana protein match is: Mitochondrial ribosomal protein L27 (TAIR:AT5G39800.1); Has 192 Blast hits to 192 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 37; Plants - 52; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR