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11-0352-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 497511 [Map]; Strand: c
      • AT1G02440.1 - [+] show detail - ADP-ribosylation factor D1A
        Distance: -32; Region: promoter
    Flanking Genome Sequence: 11-0352-1 - 5-prime edge 
    TTAACCACCA CTTGACTTTG AAAAACTCTC TCAAGGACTC TCCTTGTGAT 
    TCATATTTTC CAAAGCCAAA AAAAGTCAAC TTCGTTGCAA GAACCAGAAA 
    AAAATGGGGA CGACTCTGGG AAAGCCATTT GCCGGGTTTT TTCACCAAGA 
    AGAAGCGAGG ATCGTGTTGT TTGGTCTCGG CGGTACCGGA AAATCATCAA 
    TAATGCACAA ATTCAAAACC GGAGAAACCC TTACCACAAC CATGCCTACT 
    GTTGGTAAGT CTCTTTATCA CTCTTTGTTT TTTTCTGATC TTGAATCTAG 
    TCTTCTCTAT GAATT

AT1G02440.1

Model type
Protein coding
Short Description
ADP-ribosylation factor D1A
Curator Summary
A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins.
Computational Description
ADP-ribosylation factor D1A (ARFD1A); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Ras GTPase (InterPro:IPR001806), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor D1B (TAIR:AT1G02430.1); Has 8047 Blast hits to 8044 proteins in 397 species: Archae - 6; Bacteria - 20; Metazoa - 3487; Fungi - 1271; Plants - 1683; Viruses - 3; Other Eukaryotes - 1577 (source: NCBI BLink).
Link
InterPro Scan - TAIR