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11-0355-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2232779 [Map]; Strand: w
      • AT1G07270.1 - [+] show detail - Cell division control, Cdc6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0355-1 - 5-prime edge 
    TTGGTCGATG AGATTTCAAT TTCTTCGGCG TAGAGACTGA ATTACCAGAC 
    ACCGCCGCTG AATCCGATCT CATCTTTCTC TTCCGCGGAA TCTCATATGC 
    GGCAGATTCA AGGCTCTCGG ATTTCACCGT CGTTCCGATG GCTACAATAT 
    GCTTGTAAGA AGACAAACTT GTCCCGGCGT TGGTAGGCAT CGTTGTTAGG 
    TCACACAAGG AAATCGGAAA CGAAATTTGG CAGAGGAATT TACCCGTGCT 
    TGCGAATCAA TCTCTTGGTC GATACTACTT TGTGTAGGAG CGAGAAAGAG 
    ATGAAATTTG ATAGTAGCGG GAAACGTGAA TCGCGACATT TTCGGCTCCC 
    GCCTTTGTTC TTCTGATGCC CTTTTGAACC TACCCAGTTT CGACTAATTT 
    TTATTGGGCC GAATTGTGTA AATGGGCCAA TTGTTCACGC TGAAATTTGC 
    TTTTTGTTTT TGTTTTTGTG AGAGTTGGAT TTAAGATCCA AATACTAGTA 
    ATTGTTATGA A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2232663 [Map]; Strand: w
      • AT1G07270.1 - [+] show detail - Cell division control, Cdc6
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0355-1 - 3-prime edge 
    TCGACCAAGT TCTGTTCCCA ATCCCGGAAT GTCAGAAAAG GTAAATTGTT 
    GATGTGCATA AGTTCAATTG TTGGATCAAG TTTCTTTAGG GAATCGAATA 
    AGTATCAATC CTCAGATGTT ATTTGTTTGC AGGAAGTTGT GGAAGATTCT 
    AATGAAATTC TGAGATATCC AGTGAATTTG GCTGTGTCTG ATTGTTTAGG 
    CACTAAATCT AAGTGGAGTC CTAGAGGTAA ACCAACGTGA TC

AT1G07270.1

Model type
Protein coding
Short Description
Cell division control, Cdc6
Computational Description
Cell division control, Cdc6; FUNCTIONS IN: ATP binding; INVOLVED IN: regulation of cell cycle, DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), CDC6, C-terminal (InterPro:IPR015163), Cell division control, Cdc6 (InterPro:IPR016314); BEST Arabidopsis thaliana protein match is: cell division control 6 (TAIR:AT2G29680.2); Has 1458 Blast hits to 1448 proteins in 345 species: Archae - 437; Bacteria - 0; Metazoa - 359; Fungi - 295; Plants - 123; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink).
Link
InterPro Scan - TAIR