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11-0376-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19754164 [Map]; Strand: c
      • AT3G53270.2 - [+] show detail - Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
        Distance: -966; Region: promoter
      • AT3G53270.6 - [+] show detail - Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
        Distance: -965; Region: promoter
    Flanking Genome Sequence: 11-0376-1 - 5-prime edge 
    GGTCACNCNA NGNAGCCCCG CGTNCAGTGC TCCCCCTNCG CGCGCNGATN 
    ANCNNNCNGG ACCAGGGGAN NACNCNTGNC CTATATATCA ATTCAATTGT 
    TTCTTTACGA ATCTATGAAA ATTTTAGGAT CTCGNACTTC AGTTCAAAAA 
    TTATATATTG ACTTTATAAG CGATTATCGA TTTATTTTTA TTAGAAAGTC 
    GCAAGTTCTC TTGCAATGTG TAAAANTTCA GAGAGATAAC TCGTAACGTG 
    CAGAGCGGAA ACAAAAGAAG AAACAGCGAT TNCGAAATGC CAAACTCGAA 
    AATTNGCGTG ATTNCCANAA TTNAANGGAG CTGGAGTCCN ATCCTAGTTG 
    TCACGAGCAN ACCCANNTNG AGGNCNGTCC ACAANAATNT CCGGATCAAG 
    AACATACAAN CTCNTTTCGA TAAANTNACG CANAANNCGC NGATNACAAN 
    AANTGGANGT NAAATNACAN ATACCNATAG GNNATANGAG NATNNACNNG 
    AAAANTANAN GNANACCACC NNCNGGAGNG NNATTGGTNT AANNNGNTAG 
    TNGAGCNCNG NTGNTNANNG GANNANNCAG TGGCCNNATT GGCACCAATA 
    TCCCCGTCNT NTTTNGTGTT NAANGNAAAG TTCNAATNNA AACGCNAAAT 
    GCNCNNTNNA NNNGATTGAN NNGNNANGNN GNANNNNNNC NANGNNNNGT 
    TCTNGGNNTT ACNNAATANG NNCNNCGGNG NTGGAGNTCN GNTAN

AT3G53270.2

Model type
Protein coding
Short Description
Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Computational Description
Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein; CONTAINS InterPro DOMAIN/s: Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (InterPro:IPR019188); Has 91 Blast hits to 91 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 48; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G53270.6

Model type
Protein coding
Short Description
Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Computational Description
Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (InterPro:IPR019188).
Link
InterPro Scan - TAIR